Factsheet for TraesCS4D01G218400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G086300.1	Wheat	cytosol	78.15	98.33
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	49.67	97.4
TraesCS4B01G218100.1	Wheat	cytosol	79.47	90.91
TraesCS4D01G218300.1	Wheat	cytosol	73.51	90.24
GSMUA_Achr11P...	Banana	cytosol	47.02	87.65
TraesCS4D01G006900.1	Wheat	cytosol	72.19	84.5
TraesCS5D01G269800.1	Wheat	cytosol	68.87	77.04
TraesCS7D01G474200.1	Wheat	cytosol	70.86	76.98
TraesCS2D01G458600.1	Wheat	cytosol	72.19	76.76
TraesCS7D01G474300.1	Wheat	cytosol	70.2	76.26
TraesCS1D01G228700.1	Wheat	cytosol	70.2	76.26
TraesCS6D01G137400.1	Wheat	cytosol	67.55	75.56
TraesCS2D01G458700.1	Wheat	cytosol	70.2	74.65
TraesCS2D01G580700.1	Wheat	cytosol	65.56	71.22
TraesCS4D01G234300.1	Wheat	cytosol	72.19	68.99
TraesCS2D01G459000.1	Wheat	cytosol	61.59	67.39
TraesCS2D01G459100.1	Wheat	cytosol	60.93	66.67
TraesCS2D01G459200.1	Wheat	cytosol	59.6	65.22
TraesCS5D01G194700.1	Wheat	cytosol	59.6	62.94
TraesCS2D01G092300.1	Wheat	cytosol	55.63	57.53
TraesCS7D01G442900.1	Wheat	cytosol	56.29	55.56
TraesCS1D01G405400.1	Wheat	cytosol	56.95	55.48
TraesCS1D01G109800.1	Wheat	cytosol	56.95	55.48
TraesCS6D01G248600.1	Wheat	cytosol	56.29	55.19
TraesCS2D01G092200.1	Wheat	cytosol	56.29	55.19
TraesCS7D01G494400.1	Wheat	cytosol	54.3	53.59
TraesCS5D01G231400.1	Wheat	cytosol	54.3	53.59
TraesCS1D01G174700.1	Wheat	cytosol	56.29	52.47
TraesCS7D01G453100.1	Wheat	cytosol	53.64	52.26
TraesCS7D01G143000.1	Wheat	cytosol	53.64	52.26
TraesCS1D01G206100.1	Wheat	cytosol	52.32	50.97
TraesCS6D01G136800.1	Wheat	cytosol	47.68	49.66
TraesCS1D01G206400.1	Wheat	cytosol	50.33	49.03
TraesCS6D01G109600.1	Wheat	cytosol	58.28	38.43
TraesCS2D01G405500.1	Wheat	cytosol	57.62	38.16
TraesCS7D01G443100.1	Wheat	cytosol	57.62	37.99
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	58.28	28.85
TraesCS3D01G510800.1	Wheat	cytosol	42.38	28.57
TraesCS3D01G510400.1	Wheat	mitochondrion	40.4	27.23
TraesCS6D01G125600.1	Wheat	cytosol	57.62	26.36
TraesCS3D01G510600.1	Wheat	cytosol	39.07	26.34
TraesCS3D01G510500.1	Wheat	mitochondrion	19.87	26.32
TraesCS3D01G511200.1	Wheat	cytosol	34.44	23.42
TraesCS1D01G427100.1	Wheat	cytosol	34.44	22.91
TraesCS3D01G039700.1	Wheat	cytosol	33.77	22.57
TraesCS3D01G511000.1	Wheat	cytosol	40.4	20.61
TraesCS7D01G100100.1	Wheat	cytosol	32.45	20.42
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	39.74	20.27
TraesCS3D01G510300.2	Wheat	nucleus	39.74	20.2
TraesCS3D01G510200.1	Wheat	cytosol	29.8	20.0
TraesCS3D01G510900.1	Wheat	nucleus	39.07	19.8
TraesCS3D01G511500.1	Wheat	nucleus	35.76	18.06
TraesCS3D01G511900.1	Wheat	mitochondrion	39.07	17.88
TraesCS5D01G391800.1	Wheat	mitochondrion	31.79	16.55
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	39.07	16.08
TraesCS5D01G087500.1	Wheat	cytosol	20.53	13.54
TraesCS2D01G474700.1	Wheat	cytosol	5.3	10.39
TraesCS1D01G314000.1	Wheat	cytosol	37.09	9.49
TraesCS7D01G466600.1	Wheat	cytosol	8.61	8.5

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS4D01G218400
EnsemblPlants:TraesCS4D01G218400.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803

Description

No Description!

Coordinates

chr4D:-:373931773..373933834

Molecular Weight (calculated)

16879.6 Da

IEP (calculated)

9.612

GRAVY (calculated)

-0.470

Length

151 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN IQKESTLHLV LRLRGGTWIE PSLKELAQKY NQKKLICRKC
101: YSRLPLRATN CRKKKCGHSN QAIDSMLCLD ALNCPPATCA RRNVATATSC G

Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL

Arabidopsis Description

RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.