Factsheet for TraesCS4A01G086300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G465300.1	Wheat	cytosol, golgi	61.67	96.1
TraesCS2A01G475100.1	Wheat	cytosol	60.0	93.51
TraesCS5A01G073800.1	Wheat	cytosol	63.33	92.68
TraesCS4B01G218100.1	Wheat	cytosol	98.33	89.39
GSMUA_Achr11P...	Banana	cytosol	59.17	87.65
TraesCS4A01G306500.1	Wheat	cytosol	89.17	82.95
TraesCS4A01G086400.1	Wheat	cytosol	90.0	81.82
TraesCS4D01G218400.1	Wheat	cytosol	98.33	78.15
TraesCS6A01G148100.1	Wheat	cytosol	85.0	75.56
TraesCS7A01G487500.1	Wheat	cytosol	87.5	75.54
TraesCS2A01G458000.1	Wheat	cytosol	89.17	75.35
TraesCS2A01G458100.1	Wheat	cytosol	88.33	74.65
TraesCS4A01G077000.1	Wheat	cytosol	89.17	67.72
TraesCS2A01G458800.1	Wheat	cytosol	74.17	64.49
TraesCS2A01G458600.1	Wheat	cytosol	74.17	64.03
TraesCS1A01G227100.1	Wheat	cytosol	88.33	62.72
TraesCS5A01G196400.1	Wheat	cytosol	72.5	60.84
TraesCS2A01G093300.1	Wheat	cytosol	67.5	55.1
TraesCS1A01G105400.1	Wheat	cytosol	70.83	54.84
TraesCS1A01G397400.1	Wheat	cytosol	70.83	54.84
TraesCS1A01G397500.1	Wheat	golgi, unclear	70.83	54.84
TraesCS7A01G506300.1	Wheat	cytosol, plastid	68.33	53.59
TraesCS7A01G466500.1	Wheat	cytosol	70.83	53.12
TraesCS5A01G224000.1	Wheat	cytosol	67.5	52.94
TraesCS6A01G147500.1	Wheat	cytosol	66.67	52.29
TraesCS1A01G202800.1	Wheat	cytosol	67.5	52.26
TraesCS7A01G141700.1	Wheat	cytosol	67.5	52.26
TraesCS2A01G408200.1	Wheat	cytosol	70.83	52.15
TraesCS1A01G166000.1	Wheat	unclear	70.0	51.85
TraesCS5A01G196700.1	Wheat	cytosol	57.5	51.11
TraesCS6A01G087800.1	Wheat	extracellular	70.0	49.12
TraesCS7A01G453500.1	Wheat	cytosol	69.17	48.54
TraesCS7A01G466200.1	Wheat	cytosol	59.17	48.3
TraesCS5A01G551700.1	Wheat	cytosol	50.0	37.5
TraesCS6A01G087100.1	Wheat	cytosol	70.83	37.12
TraesCS7A01G453600.1	Wheat	cytosol	71.67	36.29
TraesCS2A01G408500.1	Wheat	cytosol	69.17	36.24
TraesCS3A01G504200.1	Wheat	cytosol	46.67	35.67
TraesCS7A01G465600.1	Wheat	cytosol	66.67	34.93
TraesCS3A01G504300.1	Wheat	cytosol	45.0	34.39
TraesCS7A01G105500.1	Wheat	cytosol	37.5	32.85
TraesCS7A01G105400.1	Wheat	cytosol	39.17	32.41
TraesCS3A01G040300.1	Wheat	cytosol	40.0	30.77
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	36.67	28.39
TraesCS7A01G453300.1	Wheat	cytosol	71.67	28.29
TraesCS3A01G503800.1	Wheat	cytosol	28.33	27.64
TraesCS3A01G504500.1	Wheat	cytosol	50.83	27.23
TraesCS6A01G266000.1	Wheat	cytosol	71.67	26.38
TraesCS3A01G504400.1	Wheat	cytosol	49.17	26.34
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	49.17	26.34
TraesCS7A01G027400.1	Wheat	cytosol	47.5	26.15
TraesCS5A01G292600.1	Wheat	cytosol	35.83	25.29
TraesCS3A01G040600.1	Wheat	cytosol	41.67	21.37
TraesCS3A01G504600.1	Wheat	nucleus	48.33	19.46
TraesCS3A01G504000.1	Wheat	cytosol	47.5	19.13
TraesCS6A01G119700.2	Wheat	cytosol	25.0	13.1
TraesCS1A01G313500.3	Wheat	cytosol, plastid	45.0	9.11
TraesCS7A01G453400.1	Wheat	cytosol	9.17	7.24
TraesCS6A01G136700.1	Wheat	cytosol	9.17	7.19
TraesCS6A01G112400.1	Wheat	cytosol	9.17	7.19

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	ncoils:Coil	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240
PFAM:PF01020	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255
InterPro:Ribosomal_L40e	InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829
EnsemblPlantsGene:TraesCS4A01G086300	EnsemblPlants:TraesCS4A01G086300.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom
TIGR:cd01803	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:90518914..90527338

Molecular Weight (calculated)

13656.7 Da

IEP (calculated)

10.249

GRAVY (calculated)

-0.627

Length

120 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN IQKESTLHLV LRLRGGTRIE PSLKELAQKY NQKKLICLKC
101: YSRLPLRATN CRKKKCGHSN

Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL

Arabidopsis Description

RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.