Factsheet for TraesCS1A01G227100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G241200.1	Wheat	cytosol	80.47	97.84
TraesCS1D01G228700.1	Wheat	cytosol	79.29	96.4
TraesCS7A01G465300.1	Wheat	cytosol, golgi	43.2	94.81
TraesCS5A01G073800.1	Wheat	cytosol	44.97	92.68
TraesCS2A01G475100.1	Wheat	cytosol	42.01	92.21
TraesCS4A01G086300.1	Wheat	cytosol	62.72	88.33
TraesCS6A01G148100.1	Wheat	cytosol	68.64	85.93
TraesCS4A01G306500.1	Wheat	cytosol	65.09	85.27
TraesCS7A01G487500.1	Wheat	cytosol	69.82	84.89
TraesCS2A01G458100.1	Wheat	cytosol	70.41	83.8
TraesCS2A01G458000.1	Wheat	cytosol	70.41	83.8
HORVU5Hr1G072680.1	Barley	cytosol	73.96	82.78
TraesCS4A01G086400.1	Wheat	cytosol	61.54	78.79
EER97248	Sorghum	cytosol	62.72	77.94
KXG35893	Sorghum	cytosol	64.5	76.76
EER97249	Sorghum	cytosol	63.91	76.6
OQU89356	Sorghum	cytosol	59.76	72.66
TraesCS2A01G458800.1	Wheat	cytosol	57.4	70.29
TraesCS4A01G077000.1	Wheat	cytosol	65.09	69.62
TraesCS2A01G458600.1	Wheat	cytosol	56.8	69.06
TraesCS5A01G196400.1	Wheat	cytosol	57.99	68.53
TraesCS2A01G093300.1	Wheat	cytosol	50.89	58.5
TraesCS5A01G196700.1	Wheat	cytosol	44.38	55.56
TraesCS1A01G397500.1	Wheat	golgi, unclear	49.7	54.19
TraesCS1A01G397400.1	Wheat	cytosol	49.7	54.19
TraesCS1A01G105400.1	Wheat	cytosol	49.7	54.19
TraesCS7A01G506300.1	Wheat	cytosol, plastid	46.15	50.98
TraesCS7A01G466500.1	Wheat	cytosol	47.93	50.62
TraesCS1A01G166000.1	Wheat	unclear	48.52	50.62
TraesCS5A01G224000.1	Wheat	cytosol	45.56	50.33
TraesCS2A01G408200.1	Wheat	cytosol	48.52	50.31
TraesCS1A01G202800.1	Wheat	cytosol	45.56	49.68
TraesCS7A01G141700.1	Wheat	cytosol	45.56	49.68
TraesCS6A01G147500.1	Wheat	cytosol	44.97	49.67
TraesCS7A01G466200.1	Wheat	cytosol	42.6	48.98
TraesCS6A01G087800.1	Wheat	extracellular	47.93	47.37
Os07t0489500-00	Rice	cytosol	70.41	46.85
TraesCS7A01G453500.1	Wheat	cytosol	47.34	46.78
TraesCS6A01G087100.1	Wheat	cytosol	50.3	37.12
TraesCS5A01G551700.1	Wheat	cytosol	34.91	36.88
TraesCS7A01G453600.1	Wheat	cytosol	50.3	35.87
TraesCS2A01G408500.1	Wheat	cytosol	48.52	35.81
TraesCS3A01G504300.1	Wheat	cytosol	32.54	35.03
TraesCS3A01G504200.1	Wheat	cytosol	31.95	34.39
TraesCS7A01G465600.1	Wheat	cytosol	46.15	34.06
TraesCS7A01G105400.1	Wheat	cytosol	27.22	31.72
TraesCS7A01G105500.1	Wheat	cytosol	25.44	31.39
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	27.22	29.68
TraesCS3A01G040300.1	Wheat	cytosol	26.63	28.85
TraesCS7A01G453300.1	Wheat	cytosol	50.3	27.96
TraesCS3A01G504500.1	Wheat	cytosol	36.69	27.68
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	36.09	27.23
TraesCS5A01G292600.1	Wheat	cytosol	26.63	26.47
TraesCS3A01G504400.1	Wheat	cytosol	34.91	26.34
TraesCS6A01G266000.1	Wheat	cytosol	50.3	26.07
TraesCS3A01G503800.1	Wheat	cytosol	18.93	26.02
TraesCS7A01G027400.1	Wheat	cytosol	33.14	25.69
TraesCS3A01G040600.1	Wheat	cytosol	29.59	21.37
TraesCS3A01G504600.1	Wheat	nucleus	34.91	19.8
TraesCS3A01G504000.1	Wheat	cytosol	33.73	19.13
TraesCS6A01G119700.2	Wheat	cytosol	15.98	11.79
TraesCS1A01G313500.3	Wheat	cytosol, plastid	32.54	9.27
TraesCS7A01G453400.1	Wheat	cytosol	6.51	7.24
TraesCS6A01G136700.1	Wheat	cytosol	6.51	7.19
TraesCS6A01G112400.1	Wheat	cytosol	6.51	7.19

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS1A01G227100
EnsemblPlants:TraesCS1A01G227100.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:397769681..397770422

Molecular Weight (calculated)

19333.6 Da

IEP (calculated)

10.589

GRAVY (calculated)

-0.747

Length

169 amino acids

Sequence
(BLAST)

001: MRSPTTTTTP LPHDDQTTEA RERLIVQPAK MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EEGRTLADYN IQKESTLHLV
101: LRLRGSTRGG YLNVEPNLLQ LALKYNEKKM VCRKCYARLP LRSTNCRKKK CGHSNQIRPK KRFVNKLSN

Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL

Arabidopsis Description

RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.