Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G039700.1 | Wheat | cytosol | 83.33 | 86.28 |
| TraesCS3A01G040300.1 | Wheat | cytosol | 54.7 | 82.05 |
| TraesCS7A01G465300.1 | Wheat | cytosol, golgi | 17.95 | 54.55 |
| TraesCS7A01G466500.1 | Wheat | cytosol | 36.32 | 53.12 |
| TraesCS2A01G408200.1 | Wheat | cytosol | 36.75 | 52.76 |
| TraesCS5A01G073800.1 | Wheat | cytosol | 18.38 | 52.44 |
| TraesCS3A01G504500.1 | Wheat | cytosol | 50.0 | 52.23 |
| TraesCS3A01G504400.1 | Wheat | cytosol | 50.0 | 52.23 |
| TraesCS2A01G475100.1 | Wheat | cytosol | 17.09 | 51.95 |
| TraesCS3A01G503700.1 | Wheat | cytosol, mitochondrion | 34.19 | 51.61 |
| TraesCS3A01G503800.1 | Wheat | cytosol | 26.92 | 51.22 |
| TraesCS6A01G087800.1 | Wheat | extracellular | 37.18 | 50.88 |
| TraesCS3A01G504100.1 | Wheat | cytosol, mitochondrion | 48.29 | 50.45 |
| TraesCS6A01G147500.1 | Wheat | cytosol | 32.91 | 50.33 |
| TraesCS5A01G224000.1 | Wheat | cytosol | 32.91 | 50.33 |
| TraesCS7A01G506300.1 | Wheat | cytosol, plastid | 32.48 | 49.67 |
| TraesCS3A01G504200.1 | Wheat | cytosol | 32.91 | 49.04 |
| TraesCS1A01G202800.1 | Wheat | cytosol | 32.48 | 49.03 |
| TraesCS3A01G504300.1 | Wheat | cytosol | 32.48 | 48.41 |
| TraesCS7A01G141700.1 | Wheat | cytosol | 32.05 | 48.39 |
| TraesCS5A01G551700.1 | Wheat | cytosol | 29.49 | 43.12 |
| TraesCS4A01G086300.1 | Wheat | cytosol | 21.37 | 41.67 |
| TraesCS7A01G453500.1 | Wheat | cytosol | 29.49 | 40.35 |
| TraesCS7A01G105400.1 | Wheat | cytosol | 24.79 | 40.0 |
| TraesCS7A01G105500.1 | Wheat | cytosol | 23.08 | 39.42 |
| TraesCS3A01G504600.1 | Wheat | nucleus | 48.72 | 38.26 |
| TraesCS4A01G306500.1 | Wheat | cytosol | 20.94 | 37.98 |
| TraesCS3A01G504000.1 | Wheat | cytosol | 47.44 | 37.25 |
| TraesCS4A01G086400.1 | Wheat | cytosol | 20.94 | 37.12 |
| TraesCS6A01G119700.2 | Wheat | cytosol | 35.9 | 36.68 |
| TraesCS2A01G408500.1 | Wheat | cytosol | 35.9 | 36.68 |
| TraesCS7A01G453600.1 | Wheat | cytosol | 36.32 | 35.87 |
| TraesCS7A01G465600.1 | Wheat | cytosol | 34.62 | 35.37 |
| TraesCS6A01G087100.1 | Wheat | cytosol | 34.62 | 35.37 |
| TraesCS6A01G148100.1 | Wheat | cytosol | 20.09 | 34.81 |
| TraesCS7A01G466200.1 | Wheat | cytosol | 21.79 | 34.69 |
| TraesCS7A01G487500.1 | Wheat | cytosol | 20.51 | 34.53 |
| TraesCS2A01G458100.1 | Wheat | cytosol | 20.94 | 34.51 |
| TraesCS2A01G458000.1 | Wheat | cytosol | 20.94 | 34.51 |
| TraesCS1A01G105400.1 | Wheat | cytosol | 22.22 | 33.55 |
| TraesCS1A01G397400.1 | Wheat | cytosol | 22.22 | 33.55 |
| TraesCS1A01G397500.1 | Wheat | golgi, unclear | 22.22 | 33.55 |
| TraesCS1A01G166000.1 | Wheat | unclear | 22.22 | 32.1 |
| TraesCS4A01G077000.1 | Wheat | cytosol | 20.94 | 31.01 |
| TraesCS2A01G458600.1 | Wheat | cytosol | 18.38 | 30.94 |
| TraesCS2A01G458800.1 | Wheat | cytosol | 17.95 | 30.43 |
| TraesCS5A01G292600.1 | Wheat | cytosol | 21.79 | 30.0 |
| TraesCS1A01G227100.1 | Wheat | cytosol | 21.37 | 29.59 |
| TraesCS5A01G196400.1 | Wheat | cytosol | 17.95 | 29.37 |
| TraesCS7A01G027400.1 | Wheat | cytosol | 26.5 | 28.44 |
| TraesCS7A01G453300.1 | Wheat | cytosol | 36.75 | 28.29 |
| TraesCS6A01G136700.1 | Wheat | cytosol | 18.38 | 28.1 |
| TraesCS6A01G112400.1 | Wheat | cytosol | 18.38 | 28.1 |
| TraesCS7A01G453400.1 | Wheat | cytosol | 17.95 | 27.63 |
| CDX79728 | Canola | cytosol | 26.5 | 27.31 |
| TraesCS5A01G196700.1 | Wheat | cytosol | 15.38 | 26.67 |
| TraesCS6A01G266000.1 | Wheat | cytosol | 36.75 | 26.38 |
| TraesCS2A01G093300.1 | Wheat | cytosol | 15.81 | 25.17 |
| TraesCS1A01G313500.3 | Wheat | cytosol, plastid | 32.05 | 12.65 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G040600.1 | EnsemblPlantsGene:TraesCS3A01G040600 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PFAM:PF00240 |
| PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SMART:SM00213 | SUPFAM:SSF54236 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3A:+:21272673..21291640
Molecular Weight (calculated)
26738.2 Da
IEP (calculated)
6.741
GRAVY (calculated)
-0.375
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIHVVETLT GRAMNLAITS SDTVNNVKAK IQHEHGFPMD QQCLIYAGEQ LDDGRTLADY GVRDGSTLGL HLHPLHEKMQ IHVVETLTGR AMNLAVTTSD
101: TVDNVKAKIH KWHGFPKDQQ CLIFANRQLD DEEEEGRTLA DLNIRNDATL LLVLHSRGMM KIYVKTLRQN FYNLEVRSTD TVYNVKEKIW AAEGIPPCQQ
201: SLIFDGKKMK DDRTLAHYNI QMYEVLYFVL NLRG
101: TVDNVKAKIH KWHGFPKDQQ CLIFANRQLD DEEEEGRTLA DLNIRNDATL LLVLHSRGMM KIYVKTLRQN FYNLEVRSTD TVYNVKEKIW AAEGIPPCQQ
201: SLIFDGKKMK DDRTLAHYNI QMYEVLYFVL NLRG
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.