Factsheet for TraesCS2A01G458000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G480400.1	Wheat	cytosol	100.0	100.0
TraesCS2D01G458600.1	Wheat	cytosol	99.3	99.3
TraesCS7A01G465300.1	Wheat	cytosol, golgi	52.82	97.4
TraesCS5A01G073800.1	Wheat	cytosol	55.63	96.34
TraesCS2A01G458100.1	Wheat	cytosol	95.77	95.77
TraesCS2A01G475100.1	Wheat	cytosol	51.41	94.81
Os09t0452700-00	Rice	cytosol, extracellular, plasma membrane, plastid	90.85	92.14
TraesCS4A01G086300.1	Wheat	cytosol	75.35	89.17
EER99330	Sorghum	cytosol	86.62	86.01
TraesCS4A01G306500.1	Wheat	cytosol	76.06	83.72
TraesCS7A01G487500.1	Wheat	cytosol	80.99	82.73
TraesCS6A01G148100.1	Wheat	cytosol	77.46	81.48
TraesCS4A01G086400.1	Wheat	cytosol	75.35	81.06
TraesCS1A01G227100.1	Wheat	cytosol	83.8	70.41
TraesCS2A01G458600.1	Wheat	cytosol	67.61	69.06
TraesCS2A01G458800.1	Wheat	cytosol	66.9	68.84
TraesCS4A01G077000.1	Wheat	cytosol	76.06	68.35
TraesCS5A01G196400.1	Wheat	cytosol	68.31	67.83
TraesCS2A01G093300.1	Wheat	cytosol	59.15	57.14
TraesCS1A01G397500.1	Wheat	golgi, unclear	59.86	54.84
TraesCS1A01G397400.1	Wheat	cytosol	59.86	54.84
TraesCS1A01G105400.1	Wheat	cytosol	59.86	54.84
TraesCS5A01G196700.1	Wheat	cytosol	51.41	54.07
TraesCS7A01G506300.1	Wheat	cytosol, plastid	57.04	52.94
TraesCS1A01G166000.1	Wheat	unclear	59.86	52.47
TraesCS5A01G224000.1	Wheat	cytosol	56.34	52.29
TraesCS7A01G466500.1	Wheat	cytosol	58.45	51.88
TraesCS6A01G147500.1	Wheat	cytosol	55.63	51.63
TraesCS1A01G202800.1	Wheat	cytosol	56.34	51.61
TraesCS7A01G141700.1	Wheat	cytosol	56.34	51.61
TraesCS2A01G408200.1	Wheat	cytosol	59.15	51.53
TraesCS7A01G466200.1	Wheat	cytosol	52.82	51.02
HORVU2Hr1G104440.1	Barley	cytosol	99.3	50.36
TraesCS6A01G087800.1	Wheat	extracellular	58.45	48.54
TraesCS7A01G453500.1	Wheat	cytosol	57.75	47.95
TraesCS5A01G551700.1	Wheat	cytosol	43.66	38.75
TraesCS6A01G087100.1	Wheat	cytosol	60.56	37.55
TraesCS7A01G453600.1	Wheat	cytosol	61.27	36.71
TraesCS2A01G408500.1	Wheat	cytosol	59.15	36.68
TraesCS3A01G504200.1	Wheat	cytosol	39.44	35.67
TraesCS3A01G504300.1	Wheat	cytosol	38.73	35.03
TraesCS7A01G465600.1	Wheat	cytosol	56.34	34.93
TraesCS7A01G105400.1	Wheat	cytosol	33.8	33.1
TraesCS7A01G105500.1	Wheat	cytosol	31.69	32.85
TraesCS3A01G040300.1	Wheat	cytosol	33.8	30.77
TraesCS7A01G453300.1	Wheat	cytosol	61.27	28.62
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	30.99	28.39
TraesCS3A01G504500.1	Wheat	cytosol	43.66	27.68
TraesCS5A01G292600.1	Wheat	cytosol	33.1	27.65
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	42.96	27.23
TraesCS3A01G503800.1	Wheat	cytosol	23.24	26.83
TraesCS6A01G266000.1	Wheat	cytosol	61.27	26.69
TraesCS3A01G504400.1	Wheat	cytosol	40.85	25.89
TraesCS7A01G027400.1	Wheat	cytosol	38.73	25.23
TraesCS3A01G040600.1	Wheat	cytosol	34.51	20.94
TraesCS3A01G504000.1	Wheat	cytosol	40.14	19.13
TraesCS3A01G504600.1	Wheat	nucleus	40.14	19.13
TraesCS6A01G119700.2	Wheat	cytosol	19.72	12.23
TraesCS1A01G313500.3	Wheat	cytosol, plastid	38.73	9.27
TraesCS7A01G453400.1	Wheat	cytosol	7.75	7.24
TraesCS6A01G136700.1	Wheat	cytosol	7.75	7.19
TraesCS6A01G112400.1	Wheat	cytosol	7.75	7.19

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS2A01G458000
EnsemblPlants:TraesCS2A01G458000.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803

Description

No Description!

Coordinates

chr2A:-:705881135..705882728

Molecular Weight (calculated)

16364.9 Da

IEP (calculated)

10.568

GRAVY (calculated)

-0.820

Length

142 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGSRGQ YPKNLEPNLR ILAQKYNENK
101: LVCRRCYARL PLRATNCRKK KCGHNNQIRE KKRFMSKFGS DS

Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL

Arabidopsis Description

RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.