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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 26579155
msms PMID: 26579155 doi
T Bonnot, E Bancel, C Chambon, J Boudet, G Branlard, P Martre
Metabolism Exploration Platform Proteomic Component, Institut National de la Recherche Agronomique Saint-Genès Champanelle, France., UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Institut National de la Recherche Agronomique Clermont-Ferrand, France ; UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Blaise Pascal University Aubière, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G466600.1 Wheat cytosol 50.16 100.0
TraesCS6D01G109600.1 Wheat cytosol 75.08 100.0
TraesCS7D01G443100.1 Wheat cytosol 74.75 99.56
TraesCS6D01G248600.1 Wheat cytosol 49.84 98.7
TraesCS7D01G454100.1 Wheat cytosol, golgi, unclear 24.92 98.7
TraesCS7D01G442900.1 Wheat cytosol 49.51 98.69
TraesCS2D01G405500.1 Wheat cytosol 73.77 98.68
TraesCS7D01G453100.1 Wheat cytosol 47.54 93.55
TraesCS2D01G474700.1 Wheat cytosol 21.64 85.71
TraesCS6D01G125600.1 Wheat cytosol 90.82 83.94
TraesCS7D01G494400.1 Wheat cytosol 40.66 81.05
TraesCS5D01G231400.1 Wheat cytosol 40.66 81.05
TraesCS6D01G136800.1 Wheat cytosol 37.05 77.93
TraesCS7D01G143000.1 Wheat cytosol 39.34 77.42
TraesCS1D01G206100.1 Wheat cytosol 38.69 76.13
TraesCS1D01G206400.1 Wheat cytosol 37.7 74.19
TraesCS4D01G218300.1 Wheat cytosol 28.2 69.92
TraesCS4D01G006900.1 Wheat cytosol 28.85 68.22
TraesCS3D01G510800.1 Wheat cytosol 49.84 67.86
TraesCS3D01G510600.1 Wheat cytosol 49.18 66.96
TraesCS5D01G087500.1 Wheat cytosol 49.51 65.94
TraesCS5D01G269800.1 Wheat cytosol 28.52 64.44
TraesCS3D01G510400.1 Wheat mitochondrion 46.89 63.84
TraesCS6D01G137400.1 Wheat cytosol 27.87 62.96
TraesCS7D01G474200.1 Wheat cytosol 28.52 62.59
TraesCS3D01G510500.1 Wheat mitochondrion 23.28 62.28
TraesCS1D01G109800.1 Wheat cytosol 31.48 61.94
TraesCS1D01G405400.1 Wheat cytosol 31.48 61.94
TraesCS7D01G474300.1 Wheat cytosol 28.2 61.87
TraesCS2D01G458600.1 Wheat cytosol 28.52 61.27
TraesCS2D01G458700.1 Wheat cytosol 28.2 60.56
TraesCS1D01G228700.1 Wheat cytosol 27.54 60.43
TraesCS4D01G218400.1 Wheat cytosol 28.85 58.28
TraesCS2D01G580700.1 Wheat cytosol 26.56 58.27
TraesCS1D01G174700.1 Wheat cytosol 30.82 58.02
TraesCS3D01G511200.1 Wheat cytosol 41.31 56.76
TraesCS2D01G459100.1 Wheat cytosol 25.25 55.8
TraesCS2D01G459200.1 Wheat cytosol 25.25 55.8
TraesCS4D01G234300.1 Wheat cytosol 28.85 55.7
TraesCS2D01G459000.1 Wheat cytosol 24.92 55.07
TraesCS3D01G039700.1 Wheat cytosol 39.34 53.1
TraesCS5D01G194700.1 Wheat cytosol 24.59 52.45
TraesCS3D01G510200.1 Wheat cytosol 38.36 52.0
TraesCS1D01G427100.1 Wheat cytosol 35.74 48.02
TraesCS3D01G510700.1 Wheat cytosol, nucleus, plastid 46.23 47.64
TraesCS3D01G511000.1 Wheat cytosol 45.25 46.62
TraesCS3D01G510900.1 Wheat nucleus 44.92 45.97
TraesCS3D01G511900.1 Wheat mitochondrion 49.51 45.76
TraesCS3D01G511500.1 Wheat nucleus 44.26 45.15
TraesCS3D01G510300.2 Wheat nucleus 43.61 44.78
TraesCS2D01G092300.1 Wheat cytosol 21.31 44.52
TraesCS5D01G391800.1 Wheat mitochondrion 41.31 43.45
TraesCS2D01G092200.1 Wheat cytosol 21.64 42.86
TraesCS7D01G024600.1 Wheat cytosol, mitochondrion 45.57 37.87
TraesCS7D01G100100.1 Wheat cytosol 28.85 36.67
TraesCS1D01G314000.1 Wheat cytosol 43.28 22.37
Protein Annotations
EnsemblPlants:TraesCS7D01G442700.1EnsemblPlantsGene:TraesCS7D01G442700Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000626InterPro:UbiquitinInterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_CSInterPro:Ubiquitin_domPANTHER:PTHR45095
PANTHER:PTHR45095:SF2PFAM:PF00240PFscan:PS50053PRINTS:PR00348ScanProsite:PS00299SMART:SM00213
SUPFAM:SSF54236TIGR:cd01803MapMan:19.2.2.1.1:::
Description
No Description!
Coordinates
chr7D:-:562148269..562149186
Molecular Weight (calculated)
34175.3 Da
IEP (calculated)
7.816
GRAVY (calculated)
-0.455
Length
305 amino acids
Sequence
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGQ
Best Arabidopsis Sequence Match ( AT5G20620.2 )
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGSF
Arabidopsis Description
UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.