Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G164600.1 | Wheat | cytosol | 69.3 | 99.56 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 69.3 | 99.56 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 46.2 | 99.35 |
| TraesCS2D01G405500.1 | Wheat | cytosol | 68.09 | 98.25 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 14.89 | 98.0 |
| TraesCS2A01G408200.1 | Wheat | cytosol | 48.02 | 96.93 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 55.32 | 96.81 |
| TraesCS6A01G087100.1 | Wheat | cytosol | 67.17 | 96.51 |
| AT1G65350.1 | Thale cress | cytosol | 90.88 | 93.73 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 53.8 | 91.71 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 69.3 | 90.84 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 49.54 | 90.06 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 37.69 | 81.05 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 25.84 | 75.89 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 24.92 | 74.55 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 69.6 | 72.01 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 69.3 | 67.46 |
| VIT_19s0177g00070.t01 | Wine grape | cytosol | 92.71 | 66.74 |
| Solyc07g064130.1.1 | Tomato | nucleus | 92.4 | 66.52 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 36.47 | 65.93 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 27.36 | 64.29 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 37.99 | 63.45 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 36.17 | 63.3 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 46.2 | 62.81 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 36.17 | 62.3 |
| PGSC0003DMT400027156 | Potato | cytosol | 69.6 | 60.1 |
| Zm00001d015327_P001 | Maize | cytosol | 94.22 | 58.16 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 35.87 | 58.13 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 35.87 | 58.13 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 26.44 | 57.62 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 92.1 | 56.85 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 20.67 | 56.67 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 33.74 | 56.06 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 25.84 | 55.56 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 65.65 | 54.96 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 31.61 | 54.17 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 29.18 | 53.63 |
| HORVU6Hr1G014970.1 | Barley | plastid | 37.99 | 52.08 |
| KRH20404 | Soybean | cytosol | 72.04 | 51.86 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 72.04 | 50.86 |
| OQU76939 | Sorghum | cytosol, plastid | 69.6 | 50.33 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 24.92 | 50.0 |
| Os02t0161900-01 | Rice | extracellular, vacuole | 72.34 | 49.17 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 26.14 | 48.59 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 23.4 | 45.83 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 26.14 | 45.03 |
| KRH20401 | Soybean | cytosol | 72.34 | 44.65 |
| KRH50099 | Soybean | cytosol, endoplasmic reticulum, nucleus | 72.34 | 44.65 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 29.79 | 43.56 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.15 | 40.65 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 29.79 | 36.57 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 31.61 | 35.49 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 27.66 | 32.5 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 35.56 | 29.55 |
| HORVU1Hr1G043930.8 | Barley | plastid | 29.18 | 22.8 |
| HORVU6Hr1G026280.2 | Barley | plastid | 23.1 | 18.77 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 34.35 | 16.52 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G019590.12 | EnsemblPlantsGene:HORVU5Hr1G019590 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PANTHER:PTHR45095 |
| PANTHER:PTHR45095:SF2 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SMART:SM00213 |
| SUPFAM:SSF54236 | UniParc:UPI000B487A67 | UniProt:A0A287QJR7 | MapMan:19.2.2.1.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:86036098..86037486
Molecular Weight (calculated)
37003.9 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.318
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: FLCIVKLEYR FSSLFDLTLL VHMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ
101: IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR LRGGMQIFVK TLTGKTITLE VESSDTIDNV
201: KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL
301: EDGRTLADYN IQKESTLHLV LRLRGGLFG
101: IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR LRGGMQIFVK TLTGKTITLE VESSDTIDNV
201: KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL
301: EDGRTLADYN IQKESTLHLV LRLRGGLFG
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGSF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGSF
Arabidopsis Description
UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.