Factsheet for Zm00001d015327_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G405500.1	Wheat	cytosol	42.78	100.0
TraesCS6B01G164600.1	Wheat	cytosol	42.4	98.69
TraesCS2A01G408200.1	Wheat	cytosol	29.64	96.93
TraesCS6A01G087100.1	Wheat	cytosol	41.09	95.63
HORVU5Hr1G019590.12	Barley	extracellular	58.16	94.22
AT1G65350.1	Thale cress	cytosol	55.35	92.48
KRH20404	Soybean	cytosol	70.73	82.49
Solyc07g064130.1.1	Tomato	nucleus	70.54	82.28
KXG29523	Sorghum	cytosol	56.47	79.0
Os02t0161900-01	Rice	extracellular, vacuole	70.54	77.69
Zm00001d053834_P002	Maize	cytosol, plastid	55.16	77.17
Zm00001d036717_P001	Maize	cytosol	21.2	73.86
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	70.73	70.73
KRH20401	Soybean	cytosol	70.54	70.54
Zm00001d005334_P001	Maize	cytosol, plastid	16.89	69.77
VIT_19s0177g00070.t01	Wine grape	cytosol	56.47	65.86
EES05681	Sorghum	cytosol	56.47	65.58
PGSC0003DMT400027156	Potato	cytosol	42.21	59.06
Zm00001d053838_P005	Maize	cytosol, plastid	56.85	56.64
Zm00001d020511_P001	Maize	plastid	17.07	47.64
Zm00001d032616_P001	Maize	plastid	13.32	45.51

Protein Annotations

EntrezGene:103626648	MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:542322	ProteinID:AAB21993.1	ProteinID:AAB21994.1
ProteinID:AQK60495.1	ProteinID:AQK68671.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626
PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF240
UniProt:Q42415	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI00000A6F32	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	EnsemblPlantsGene:Zm00001d015327	EnsemblPlants:Zm00001d015327_P001	EnsemblPlants:Zm00001d015327_T001	:

Description

ubiquitin1 ubiquitin1

Coordinates

chr5:-:84630842..84634232

Molecular Weight (calculated)

59697.2 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.450

Length

533 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI
501: FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGQ

Best Arabidopsis Sequence Match ( AT4G05320.2 )
(BLAST)

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.