Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G103550.4 | Barley | cytosol | 71.7 | 99.56 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 47.8 | 99.35 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 15.41 | 98.0 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 52.83 | 92.82 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 55.97 | 92.23 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 71.7 | 90.84 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 96.23 | 90.53 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 38.99 | 81.05 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 61.64 | 80.99 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 26.1 | 74.11 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 25.16 | 72.73 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 72.01 | 69.6 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 37.42 | 65.38 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 39.62 | 63.96 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 27.67 | 62.86 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 37.11 | 62.77 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 37.42 | 62.3 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 37.74 | 59.11 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 37.74 | 59.11 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 33.33 | 56.38 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 26.73 | 56.29 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 34.91 | 56.06 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 26.73 | 55.56 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 20.75 | 55.0 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 30.19 | 53.63 |
| HORVU6Hr1G014970.1 | Barley | plastid | 39.62 | 52.5 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 73.58 | 50.21 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 25.79 | 50.0 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 27.36 | 49.15 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 60.06 | 48.6 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 28.62 | 47.4 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 23.58 | 44.64 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 26.42 | 43.98 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 72.01 | 42.96 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 29.56 | 41.78 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.13 | 41.29 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 32.39 | 38.43 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 31.13 | 33.79 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 27.67 | 31.43 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 35.85 | 28.79 |
| HORVU1Hr1G043930.8 | Barley | plastid | 30.19 | 22.8 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 45.28 | 21.05 |
| HORVU6Hr1G026280.2 | Barley | plastid | 25.47 | 20.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G102840.1 | EnsemblPlantsGene:HORVU7Hr1G102840 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PANTHER:PTHR45095 |
| PANTHER:PTHR45095:SF2 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SignalP:SignalP-noTM |
| SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI000B484F79 | UniProt:A0A287XMG3 | MapMan:19.2.2.1.1 | : |
Description
No Description!
Coordinates
chrchr7H:-:612101286..612104275
Molecular Weight (calculated)
35770.4 Da
IEP (calculated)
8.760
GRAVY (calculated)
-0.364
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTLILRAL FFQMQIFVKT LTGKTITLEV ESSDTIDNVK AKIQDKEGIP PDQQRLIFAG KQLEDGRTLA DYNIQKESTL HLVLRLRGGM QIFVKTLTGK
101: TITLEVESSD TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGMQIFV KTLTGKTITL EVESSDTIDN VKAKIQDKEG
201: IPPDQQRLIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD QQRLIFAGKQ LEDGRTLADY
301: NIQKESTLHL VLRLRGGQ
101: TITLEVESSD TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGMQIFV KTLTGKTITL EVESSDTIDN VKAKIQDKEG
201: IPPDQQRLIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD QQRLIFAGKQ LEDGRTLADY
301: NIQKESTLHL VLRLRGGQ
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
Arabidopsis Description
UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.