Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G222800.1 | Wheat | cytosol | 77.67 | 100.0 |
| TraesCS7B01G413800.1 | Wheat | cytosol | 77.16 | 99.35 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 77.16 | 99.35 |
| PGSC0003DMT400029234 | Potato | cytosol | 77.16 | 98.7 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 24.87 | 98.0 |
| Zm00001d036717_P001 | Maize | cytosol | 71.07 | 91.5 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 70.56 | 76.37 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 69.54 | 72.87 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 40.61 | 72.73 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 74.62 | 72.41 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 74.62 | 72.41 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 41.12 | 72.32 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 70.05 | 72.25 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 71.07 | 70.71 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 64.47 | 70.17 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 40.1 | 56.43 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 62.94 | 54.15 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 52.28 | 53.37 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 40.61 | 52.98 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 31.47 | 51.67 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 62.94 | 49.4 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 37.56 | 48.37 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 40.1 | 48.17 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 43.65 | 48.04 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 41.12 | 45.76 |
| HORVU6Hr1G014970.1 | Barley | plastid | 54.82 | 45.0 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 40.61 | 41.88 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 39.59 | 41.49 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 35.03 | 41.07 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.98 | 40.65 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 63.96 | 39.62 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 63.45 | 37.99 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 63.45 | 36.98 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 35.53 | 36.46 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 41.12 | 36.0 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 42.64 | 34.71 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 43.15 | 31.72 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 24.37 | 31.37 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 42.64 | 30.0 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 58.38 | 29.26 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 43.15 | 29.01 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 67.51 | 28.54 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 65.48 | 24.2 |
| HORVU1Hr1G043930.8 | Barley | plastid | 44.16 | 20.67 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 38.07 | 18.94 |
| HORVU6Hr1G026280.2 | Barley | plastid | 34.52 | 16.79 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 34.52 | 9.94 |
Protein Annotations
| MapMan:19.2.2.3.1 | Gene3D:3.10.20.90 | UniProt:A0A287RJZ8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU5Hr1G065170 | EnsemblPlants:HORVU5Hr1G065170.1 | InterPro:IPR000626 | InterPro:Nedd8-like | PFAM:PF00240 | PRINTS:PR00348 |
| ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF238 | SMART:SM00213 | SUPFAM:SSF54236 |
| UniParc:UPI000B482358 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:498809504..498811647
Molecular Weight (calculated)
22091.7 Da
IEP (calculated)
9.377
GRAVY (calculated)
-0.503
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: PTRGEKERIF RFVFACFRSL LRRPHATSLT PSPPHARAAG EGEKMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL
101: ADYNIQKEST LHLVLRLRGG TMIKVKTLTG KEIEIDIEPT DTIDRIKERV EEKEGIPPVQ QRLIYAGKQL ADDKTAKDYN IEGGSVLHLV LALRGGY
101: ADYNIQKEST LHLVLRLRGG TMIKVKTLTG KEIEIDIEPT DTIDRIKERV EEKEGIPPVQ QRLIYAGKQL ADDKTAKDYN IEGGSVLHLV LALRGGY
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
Arabidopsis Description
RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.