Factsheet for HORVU7Hr1G113500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 26928395

msms PMID: 26928395 doi

A Sultan, B Andersen, B Svensson, C Finnie

Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88734	Sorghum	cytosol	100.0	100.0
EER96746	Sorghum	cytosol	99.35	99.35
PGSC0003DMT400029234	Potato	cytosol	99.35	98.7
HORVU4Hr1G040980.1	Barley	cytosol	32.03	98.0
Zm00001d036717_P001	Maize	cytosol	91.5	91.5
HORVU5Hr1G065170.1	Barley	cytosol	99.35	77.16
HORVU7Hr1G029150.2	Barley	cytosol	89.54	75.27
HORVU4Hr1G001170.5	Barley	cytosol	52.29	72.73
HORVU7Hr1G029070.1	Barley	cytosol	88.24	71.81
HORVU7Hr1G029100.1	Barley	cytosol	89.54	71.73
HORVU4Hr1G065100.3	Barley	cytosol	52.29	71.43
HORVU6Hr1G029050.1	Barley	cytosol	90.85	70.2
HORVU7Hr1G103160.4	Barley	cytosol	81.05	68.51
HORVU3Hr1G014180.3	Barley	cytosol	90.85	68.47
HORVU3Hr1G014150.2	Barley	cytosol	90.85	68.47
HORVU7Hr1G109650.2	Barley	cytosol	51.63	56.43
HORVU7Hr1G103550.4	Barley	cytosol	81.05	54.15
HORVU6Hr1G016150.3	Barley	cytosol	67.32	53.37
HORVU4Hr1G061980.1	Barley	cytosol	40.52	51.67
HORVU5Hr1G072680.1	Barley	cytosol	50.98	51.66
HORVU6Hr1G026200.5	Barley	cytosol	81.05	49.4
HORVU3Hr1G111000.1	Barley	cytosol	48.37	48.37
HORVU6Hr1G014910.1	Barley	cytosol	51.63	48.17
HORVU1Hr1G023660.1	Barley	extracellular	56.21	48.04
HORVU2Hr1G104410.26	Barley	cytosol	52.94	45.76
HORVU6Hr1G014970.1	Barley	plastid	69.28	44.17
HORVU5Hr1G019600.6	Barley	cytosol	50.98	41.49
HORVU4Hr1G061900.2	Barley	nucleus, plastid	50.33	40.31
HORVU7Hr1G103380.2	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.52	40.0
HORVU5Hr1G056730.1	Barley	cytosol, plastid	43.14	39.29
HORVU7Hr1G102840.1	Barley	endoplasmic reticulum, extracellular, vacuole	81.05	38.99
HORVU5Hr1G019590.12	Barley	extracellular	81.05	37.69
HORVU6Hr1G020140.6	Barley	cytosol	46.41	36.98
HORVU6Hr1G021700.4	Barley	cytosol	80.39	36.39
HORVU0Hr1G038500.2	Barley	cytosol	54.9	34.71
HORVU3Hr1G110900.1	Barley	cytosol	49.02	33.33
HORVU1Hr1G087690.8	Barley	nucleus	55.56	31.72
HORVU7Hr1G107010.1	Barley	cytosol	31.37	31.37
HORVU2Hr1G104440.1	Barley	cytosol	52.94	28.93
HORVU7Hr1G103330.1	Barley	cytosol	71.9	27.99
HORVU3Hr1G110970.1	Barley	cytosol, nucleus, plastid	51.63	26.96
HORVU6Hr1G026260.1	Barley	cytosol, extracellular, plasma membrane	81.05	26.61
HORVU7Hr1G103170.9	Barley	cytosol, plasma membrane	78.43	22.51
HORVU1Hr1G043930.8	Barley	plastid	55.56	20.19
HORVU4Hr1G089720.1	Barley	nucleus	47.71	18.43
HORVU6Hr1G026280.2	Barley	plastid	43.14	16.3
HORVU5Hr1G094230.2	Barley	cytosol	41.83	9.36

Protein Annotations

MapMan:19.2.2.3.1	Gene3D:3.10.20.90	UniProt:A0A287XUU2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU7Hr1G113500	EnsemblPlants:HORVU7Hr1G113500.1	InterPro:IPR000626	InterPro:Nedd8-like	PFAM:PF00240	PRINTS:PR00348
ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF230	SMART:SM00213	SUPFAM:SSF54236
UniParc:UPI00003D6E68	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	SEG:seg

Description

No Description!

Coordinates

chrchr7H:+:637197421..637200515

Molecular Weight (calculated)

17095.7 Da

IEP (calculated)

5.849

GRAVY (calculated)

-0.462

Length

153 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGQ

Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL

Arabidopsis Description

RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.