CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32433	Soybean	cytosol, endoplasmic reticulum	79.53	99.02
KRH19844	Soybean	cytosol	59.58	98.7
KRH02501	Soybean	cytosol	36.75	91.5
KRH13718	Soybean	cytosol, endoplasmic reticulum, nucleus	32.28	79.87
KRH43738	Soybean	cytosol	32.28	79.87
KRG91230	Soybean	cytosol	59.84	74.75
KRH19455	Soybean	cytosol	59.84	74.75
KRH35592	Soybean	cytosol	59.84	74.75
KRH02499	Soybean	cytosol	72.18	72.18
KRH38035	Soybean	cytosol	23.88	70.0
KRG96204	Soybean	cytosol	23.1	68.75
KRH67947	Soybean	cytosol	23.1	68.75
KRH64348	Soybean	cytosol, endoplasmic reticulum	23.1	68.75
KRH53585	Soybean	cytosol	23.1	68.75
KRH11776	Soybean	nucleus	25.2	61.94
KRH69588	Soybean	nucleus	25.2	61.94
KRH74571	Soybean	cytosol	25.2	61.94
KRH36782	Soybean	nucleus	24.93	61.29
KRG99541	Soybean	cytosol	16.54	56.76
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	68.5	48.97
KRH20401	Soybean	cytosol	68.5	48.97
KRH20404	Soybean	cytosol	48.82	40.7
VIT_14s0036g00930.t01	Wine grape	extracellular	79.53	30.45

Protein Annotations

EntrezGene:100791065	EntrezGene:100799042	EntrezGene:100819694	MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EMBL:ACUP02008180
EnsemblPlantsGene:GLYMA_13G117700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LYE4	InterPro:IPR000626
EnsemblPlants:KRH19453	ProteinID:KRH19453	ProteinID:KRH19453.1	PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299
PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI00023CF263
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:	:

Description

hypothetical protein

Coordinates

chr13:-:23082788..23083933

Molecular Weight (calculated)

42687.6 Da

IEP (calculated)

7.853

GRAVY (calculated)

-0.437

Length

381 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTVTLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F

Best Arabidopsis Sequence Match ( AT4G05320.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.