CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19844	Soybean	cytosol	75.16	100.0
KRH02501	Soybean	cytosol	45.75	91.5
KRH13718	Soybean	cytosol, endoplasmic reticulum, nucleus	40.2	79.87
KRH43738	Soybean	cytosol	40.2	79.87
KRH19453	Soybean	cytosol	99.02	79.53
KRG91230	Soybean	cytosol	74.51	74.75
KRH19455	Soybean	cytosol	74.51	74.75
KRH35592	Soybean	cytosol	74.51	74.75
KRH02499	Soybean	cytosol	90.2	72.44
KRH38035	Soybean	cytosol	29.74	70.0
KRG96204	Soybean	cytosol	28.76	68.75
KRH67947	Soybean	cytosol	28.76	68.75
KRH64348	Soybean	cytosol, endoplasmic reticulum	28.76	68.75
KRH53585	Soybean	cytosol	28.76	68.75
KRH74571	Soybean	cytosol	31.37	61.94
KRH69588	Soybean	nucleus	31.37	61.94
KRH11776	Soybean	nucleus	31.37	61.94
KRH36782	Soybean	nucleus	31.05	61.29
KRG99541	Soybean	cytosol	20.59	56.76
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	85.62	49.16
KRH20401	Soybean	cytosol	85.62	49.16
KRH20404	Soybean	cytosol	60.78	40.7

Protein Annotations

EntrezGene:100815545	MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EMBL:ACUP02006116	EnsemblPlantsGene:GLYMA_10G051100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009719	GO:GO:0009751	UniProt:I1L8T7
InterPro:IPR000626	EnsemblPlants:KRH32433	ProteinID:KRH32433	ProteinID:KRH32433.1	PFAM:PF00240	PRINTS:PR00348
ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	SMART:SM00213	SUPFAM:SSF54236
UniParc:UPI000233C390	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:

Description

hypothetical protein

Coordinates

chr10:-:4575915..4577845

Molecular Weight (calculated)

34309.4 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.444

Length

306 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGDF

Best Arabidopsis Sequence Match ( AT5G20620.2 )
(BLAST)

Arabidopsis Description

UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.