Factsheet for AT4G05320.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G02890.3	Thale cress	cytosol	66.52	99.67
AT4G05050.2	Thale cress	cytosol	49.89	99.56
AT1G55060.1	Thale cress	cytosol	47.26	93.91
AT1G65350.1	Thale cress	cytosol	65.43	93.73
AT2G35635.1	Thale cress	cytosol	26.91	79.87
AT1G31340.1	Thale cress	cytosol	27.13	79.49
AT2G36170.1	Thale cress	cytosol	19.69	70.31
AT3G52590.1	Thale cress	cytosol	19.69	70.31
AT5G37640.1	Thale cress	cytosol	48.14	68.32
AT3G62250.1	Thale cress	cytosol	21.66	63.06
AT2G47110.1	Thale cress	cytosol	21.44	62.42
AT5G20620.1	Thale cress	cytosol	50.11	59.95
AT1G23410.1	Thale cress	cytosol	20.35	59.62
AT5G03240.3	Thale cress	cytosol	33.48	50.0
AT3G09790.2	Thale cress	cytosol	55.8	40.41

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:825847	EntrezGene:825880	EntrezGene:828148	UniProt:A0A178V0T6
EMBL:AC012392	ProteinID:AEE82500.1	ProteinID:AEE82502.1	ProteinID:AEE82503.1	ProteinID:ANM67151.1	ArrayExpress:AT4G05320
EnsemblPlantsGene:AT4G05320	RefSeq:AT4G05320	TAIR:AT4G05320	RefSeq:AT4G05320-TAIR-G	EnsemblPlants:AT4G05320.2	TAIR:AT4G05320.2
EMBL:AY139999	Unigene:At.25274	EMBL:BT000701	ProteinID:CAB81074.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009751	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	EMBL:L05361	RefSeq:NP_001118922.1	RefSeq:NP_001328998.1	RefSeq:NP_849292.1
RefSeq:NP_849299.4	RefSeq:NP_849301.4	RefSeq:NP_974516.4	ProteinID:OAO99363.1	PFAM:PF00240	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0006339
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00348	ScanProsite:PS00299
PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	UniProt:Q8H159	SMART:SM00213	SUPFAM:SSF54236
Symbol:UBQ10	UniParc:UPI00000AC751	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom

Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]

Coordinates

chr4:+:2717977..2720308

Molecular Weight (calculated)

51208.9 Da

IEP (calculated)

7.882

GRAVY (calculated)

-0.438

Length

457 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.