Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G176000.1 | Wheat | cytosol | 97.4 | 98.04 |
| TraesCS5A01G224000.1 | Wheat | cytosol | 97.4 | 98.04 |
| TraesCS6A01G147500.1 | Wheat | cytosol | 96.75 | 97.39 |
| AT1G31340.1 | Thale cress | cytosol | 98.05 | 96.79 |
| TraesCS6D01G136800.1 | Wheat | cytosol | 90.91 | 96.55 |
| CDY31710 | Canola | cytosol | 98.05 | 95.57 |
| CDX84182 | Canola | cytosol | 98.05 | 94.97 |
| GSMUA_Achr4P04260_001 | Banana | cytosol | 57.14 | 84.62 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 89.61 | 69.7 |
| AT2G36170.1 | Thale cress | cytosol | 53.25 | 64.06 |
| AT3G52590.1 | Thale cress | cytosol | 53.25 | 64.06 |
| Zm00001d020511_P001 | Maize | plastid | 75.32 | 60.73 |
| AT3G62250.1 | Thale cress | cytosol | 57.14 | 56.05 |
| AT2G47110.1 | Thale cress | cytosol | 56.49 | 55.41 |
| AT1G23410.1 | Thale cress | cytosol | 55.84 | 55.13 |
| AT1G55060.1 | Thale cress | cytosol | 73.38 | 49.13 |
| AT4G02890.3 | Thale cress | cytosol | 79.87 | 40.33 |
| AT1G65350.1 | Thale cress | cytosol | 79.22 | 38.24 |
| AT5G03240.3 | Thale cress | cytosol | 75.32 | 37.91 |
| AT5G37640.1 | Thale cress | cytosol | 75.97 | 36.34 |
| AT5G20620.1 | Thale cress | cytosol | 79.87 | 32.2 |
| AT4G05320.2 | Thale cress | cytosol | 79.87 | 26.91 |
| AT4G05050.2 | Thale cress | cytosol | 30.52 | 20.52 |
| AT3G09790.2 | Thale cress | cytosol | 70.13 | 17.12 |
Protein Annotations
| MapMan:19.2.2.3.1 | Gene3D:3.10.20.90 | EntrezGene:818132 | UniProt:A0A178VL95 | ProteinID:AAM15116.1 | ProteinID:AEC09134.1 |
| EMBL:AK118678 | ArrayExpress:AT2G35635 | EnsemblPlantsGene:AT2G35635 | RefSeq:AT2G35635 | TAIR:AT2G35635 | RefSeq:AT2G35635-TAIR-G |
| EnsemblPlants:AT2G35635.1 | TAIR:AT2G35635.1 | EMBL:AY074850 | EMBL:AY093802 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR000626 | RefSeq:NP_565812.1 | InterPro:Nedd8-like | ProteinID:OAP07167.1 | PFAM:PF00240 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00348 | ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF230 |
| UniProt:Q8RUC6 | SMART:SM00213 | SUPFAM:SSF54236 | Symbol:UBQ7 | UniParc:UPI00000AC654 | InterPro:Ubiquitin |
| InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | SEG:seg | : | : |
Description
RUB2UBQ7 [Source:UniProtKB/TrEMBL;Acc:A0A178VL95]
Coordinates
chr2:+:14980891..14982500
Molecular Weight (calculated)
17150.9 Da
IEP (calculated)
5.849
GRAVY (calculated)
-0.353
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.