Factsheet for AT3G09790.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G05050.2	Thale cress	cytosol	30.11	82.97
AT1G55060.1	Thale cress	cytosol	29.32	80.43
AT2G35635.1	Thale cress	cytosol	17.12	70.13
AT1G31340.1	Thale cress	cytosol	17.27	69.87
AT4G02890.3	Thale cress	cytosol	31.06	64.26
AT5G37640.1	Thale cress	cytosol	30.9	60.56
AT1G65350.1	Thale cress	cytosol	30.59	60.5
AT2G36170.1	Thale cress	cytosol	12.2	60.16
AT3G52590.1	Thale cress	cytosol	12.2	60.16
AT4G05320.2	Thale cress	cytosol	40.41	55.8
AT3G62250.1	Thale cress	cytosol	13.31	53.5
AT2G47110.1	Thale cress	cytosol	13.15	52.87
AT1G23410.1	Thale cress	cytosol	12.68	51.28
AT5G03240.3	Thale cress	cytosol	20.44	42.16
AT5G20620.1	Thale cress	cytosol	21.71	35.86

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:820137	UniProt:A0A178VJQ5	ProteinID:AAA68879.1	ProteinID:AAF23256.1
ProteinID:AAF23307.1	ProteinID:AEE74813.1	ProteinID:ANM63421.1	ArrayExpress:AT3G09790	EnsemblPlantsGene:AT3G09790	RefSeq:AT3G09790
TAIR:AT3G09790	RefSeq:AT3G09790-TAIR-G	EnsemblPlants:AT3G09790.2	Unigene:At.65074	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005773	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0019538	GO:GO:0030312	InterPro:IPR000626	RefSeq:NP_001319513.1	RefSeq:NP_566357.1
ProteinID:OAP06569.1	PFAM:PF00240	PRINTS:PR00348	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF240
UniProt:Q39256	SMART:SM00213	SUPFAM:SSF54236	Symbol:UBQ8	UniParc:UPI00000A3588	InterPro:Ubiquitin
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

UBQ8Polyubiquitin 8 [Source:UniProtKB/Swiss-Prot;Acc:Q39256]

Coordinates

chr3:-:3003862..3006250

Molecular Weight (calculated)

71773.3 Da

IEP (calculated)

9.525

GRAVY (calculated)

-0.289

Length

631 amino acids

Sequence
(BLAST)

001: MTIQIYAKTL TEKTITLDVE TSDSIHNVKA KIQNKEGIPL DQQRLIFAGK QLEDGLTLAD YNIQKESTLH LVLRLRGGMQ IFVQTLTGKT ITLEVKSSDT
101: IDNVKAKIQD KEGILPRQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR LCGGMQIFVS TFSGKNFTSD TLTLKVESSD TIENVKAKIQ DREGLRPDHQ
201: RLIFHGEELF TEDNRTLADY GIRNRSTLCL ALRLRGDMYI FVKNLPYNSF TGENFILEVE SSDTIDNVKA KLQDKERIPM DLHRLIFAGK PLEGGRTLAH
301: YNIQKGSTLY LVTRFRCGMQ IFVKTLTRKR INLEVESWDT IENVKAMVQD KEGIQPQPNL QRLIFLGKEL KDGCTLADYS IQKESTLHLV LGMQIFVKLF
401: GGKIITLEVL SSDTIKSVKA KIQDKVGSPP DQQILLFRGG QLQDGRTLGD YNIRNESTLH LFFHIRHGMQ IFVKTFSFSG ETPTCKTITL EVESSDTIDN
501: VKVKIQHKVG IPLDRQRLIF GGRVLVGSRT LLDYNIQKGS TIHQLFLQRG GMQIFIKTLT GKTIILEVES SDTIANVKEK IQVKEGIKPD QQMLIFFGQQ
601: LEDGVTLGDY DIHKKSTLYL VLRLRQRRYD F

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.