Factsheet for TraesCSU01G191900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G499100.1	Wheat	cytosol	99.36	38.85
TraesCS4A01G496400.1	Wheat	mitochondrion	97.44	20.11
OQU80191	Sorghum	cytosol, mitochondrion	80.13	16.6
EES14558	Sorghum	cytosol	80.13	16.49
KXG24790	Sorghum	cytosol, mitochondrion	79.49	15.64
Zm00001d052971_P005	Maize	mitochondrion	75.64	15.61
KXG28793	Sorghum	mitochondrion	66.03	13.45
OQU80182	Sorghum	mitochondrion	62.18	13.32
HORVU7Hr1G047800.10	Barley	mitochondrion	43.59	9.78
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	1.92	1.55
VIT_10s0003g03550.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G191900.1	EnsemblPlantsGene:TraesCSU01G191900	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF14	PFAM:PF13243
ScanProsite:PS01074	SUPFAM:SSF48239	TMHMM:TMhelix	MapMan:9.1.4.3	:	:

Description

No Description!

Coordinates

chrUn:+:288792231..288794785

Molecular Weight (calculated)

17567.7 Da

IEP (calculated)

6.232

GRAVY (calculated)

-0.149

Length

156 amino acids

Sequence
(BLAST)

001: MFIENSQRKD GSWFGIWGIC FTYGTLFAVK GLIAAGSTYD NSSFIRKACN FLLSKQLSTG GWGETYLSSE TKSYVDATSP HAVNTAWAML ALVYAGQVER
101: DPTPLYHAAK ELMNMQLDTG EFPQQEHVGC FNCSVYFNYG NYCNLYPIWA IGEFRR

Best Arabidopsis Sequence Match ( AT3G45130.1 )
(BLAST)

001: MWRLKLSEGD EESVNQHVGR QFWEYDNQFG TSEERHHINH LRSNFTLNRF SSKHSSDLLY RFQCWKEKGK GMERLPQVKV KEGEERLINE EVVNVTLRRS
101: LRFYSILQSQ DGFWPGDYGG PLFLLPALVI GLYVTEVLDG TLTAQHQIEI RRYLYNHQNK DGGWGLHVEG NSTMFCTVLS YVALRLMGEE LDGGDGAMES
201: ARSWIHHHGG ATFIPSWGKF WLSVLGAYEW SGNNPLPPEL WLLPYSLPFH PGRMWCHCRM VYLPMSYLYG RRFVCRTNGT ILSLRRELYT IPYHHIDWDT
301: ARNQCAKEDL YYPHPKIQDV LWSCLNKFGE PLLERWPLNN LRNHALQTVM QHIHYEDQNS HYICIGPVNK VLNMLCCWVE SSNSEAFKSH LSRIKDYLWV
401: AEDGMKMQGY NGSQLWDVTL AVQAILATNL VDDYGLMLKK AHNYIKNTQI RKDTSGDPGL WYRHPCKGGW GFSTGDNPWP VSDCTAEALK AALLLSQMPV
501: NLVGEPMPEE HLVDAVNFIL SLQNKNGGFA SYELTRSYPE LEVINPSETF GDIIIDYQYV ECTSAAIQGL VLFTTLNSSY KRKEIVGSIN KAVEFIEKTQ
601: LPDGSWYGSW GVCFTYATWF GIKGMLASGK TYESSLCIRK ACGFLLSKQL CCGGWGESYL SCQNKVYTNL PGNKSHIVNT SWALLALIEA GQASRDPMPL
701: HRGAKSLINS QMEDGDYPQQ EILGVFNRNC MISYSAYRNI FPIWALGEYR KLMLSL

Arabidopsis Description

LAS1Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.