Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052971_P005 | Maize | mitochondrion | 84.33 | 85.45 |
| TraesCS7B01G131400.1 | Wheat | mitochondrion | 74.15 | 75.63 |
| TraesCS7D01G233100.2 | Wheat | mitochondrion | 73.76 | 75.23 |
| TraesCS7A01G232900.1 | Wheat | mitochondrion | 73.76 | 75.23 |
| TraesCS7A01G001700.1 | Wheat | mitochondrion | 66.71 | 74.06 |
| HORVU7Hr1G047800.10 | Barley | mitochondrion | 66.45 | 73.24 |
| TraesCS7D01G173600.1 | Wheat | cytosol | 51.31 | 73.18 |
| TraesCS4A01G498200.2 | Wheat | cytosol | 71.54 | 72.97 |
| OQU80182 | Sorghum | mitochondrion | 67.89 | 71.43 |
| TraesCS4A01G496400.1 | Wheat | mitochondrion | 69.06 | 69.97 |
| TraesCS7D01G001800.3 | Wheat | mitochondrion | 39.03 | 69.05 |
| TraesCS4A01G499100.1 | Wheat | cytosol | 35.9 | 68.92 |
| EES14558 | Sorghum | cytosol | 68.15 | 68.87 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 67.36 | 68.53 |
| TraesCS7D01G173700.1 | Wheat | cytosol, mitochondrion | 20.1 | 68.44 |
| Os06t0483200-02 | Rice | cytosol, mitochondrion, peroxisome, plastid | 17.23 | 68.39 |
| EER90340 | Sorghum | cytosol | 64.62 | 67.44 |
| TraesCSU01G191900.1 | Wheat | extracellular, vacuole | 13.45 | 66.03 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 67.89 | 65.57 |
| HORVU0Hr1G025390.3 | Barley | endoplasmic reticulum | 64.36 | 63.53 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 52.87 | 62.99 |
| OQU77014 | Sorghum | cytosol | 53.0 | 61.24 |
| EES04501 | Sorghum | cytosol | 56.66 | 58.73 |
| KXG35171 | Sorghum | extracellular | 48.3 | 58.64 |
| EES17376 | Sorghum | mitochondrion | 57.31 | 57.92 |
| KXG23805 | Sorghum | cytosol | 57.18 | 57.86 |
| OQU91432 | Sorghum | cytosol | 59.92 | 57.81 |
| EES06259 | Sorghum | cytosol | 55.35 | 56.01 |
| EES06258 | Sorghum | cytosol | 54.7 | 55.06 |
| OQU83221 | Sorghum | cytosol | 52.22 | 52.22 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 13.19 | 50.75 |
| KXG28324 | Sorghum | cytosol | 17.49 | 48.73 |
| EES13537 | Sorghum | cytosol | 46.87 | 47.11 |
| HORVU7Hr1G047790.3 | Barley | cytosol, extracellular | 4.31 | 42.31 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 5.35 | 41.0 |
| KXG29303 | Sorghum | cytosol | 4.31 | 40.24 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A1B6PSZ6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| GO:GO:0016866 | EnsemblPlants:KXG28793 | ProteinID:KXG28793 | ProteinID:KXG28793.1 | PFAM:PF13243 | PFAM:PF13249 |
| PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | EnsemblPlantsGene:SORBI_3005G167200 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 |
| InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00081ADA7F | : | : |
Description
hypothetical protein
Coordinates
chr5:+:64481975..64508002
Molecular Weight (calculated)
87478.2 Da
IEP (calculated)
6.547
GRAVY (calculated)
-0.287
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLRIGEGS GPWLRSANNF IGRQVWEFDP DAGSQDELAE IERLRKEFTE NRFQKRVSQD LLLRMQYAKQ NDLQVDVPVI KLAHSAEVTE ETILASLRRA
101: LAQYSTLQAH DGHWPCDYSG VMFIMPILVF ALYVTGSLNT VLSTQHRYEI CRYIYNHQNE DGGWGMQELG PSTMFSSCLN YVTLRLLGEV CTHDALIKGR
201: AWILSHGSAA AIPQWGKIWL SVIGLYDWNG NNSIIPELWL VPYSLPFHPG RFWCFCRLIY MPMAYLYGKK FVGPITPTIL SIRDEIYKIS YDEIDWNKAR
301: DTCAKEDLLY PRSFVQNVIW TSVNKIVEPL LNFWPAKMLR DTALKKIMKH IHYEDESTRY LCICPVNKAL NMICCWVENP NSDAFKQHLP RIYDYLWLAE
401: DGMKLKVYDG TQAWDTAFIV KGYCSTDLVH EFSPTLRKAH EFIKSLQIPE NQPDHENYYR HRSKGSWAHS TIDNGWSVSD STAEAIQALL MLSKISSNLV
501: GDPIKEERLY DAVDCLLSFM NKDGTFSTYE CKRTASLLEV LNPSETFLNI VVDHPSVECT SSATQALVMF RELYPGYRDE EIKNCIKGAS KFIESKQRKD
601: GTWFGTWGVC FTYGTLFAVQ GLVAAGRTYE NSSSIRKACS FLLSKQLSTG GWGETYPSNE TEVYAEATSP HAVNTAWAML ALIYAGQVKR DPTPLYGAAK
701: ELINMQQESG EFPQQVSGPA WTSYRPTISN EEEQVVQDVM WPSEHARARW PTRRGPWAVG LRAGCC
101: LAQYSTLQAH DGHWPCDYSG VMFIMPILVF ALYVTGSLNT VLSTQHRYEI CRYIYNHQNE DGGWGMQELG PSTMFSSCLN YVTLRLLGEV CTHDALIKGR
201: AWILSHGSAA AIPQWGKIWL SVIGLYDWNG NNSIIPELWL VPYSLPFHPG RFWCFCRLIY MPMAYLYGKK FVGPITPTIL SIRDEIYKIS YDEIDWNKAR
301: DTCAKEDLLY PRSFVQNVIW TSVNKIVEPL LNFWPAKMLR DTALKKIMKH IHYEDESTRY LCICPVNKAL NMICCWVENP NSDAFKQHLP RIYDYLWLAE
401: DGMKLKVYDG TQAWDTAFIV KGYCSTDLVH EFSPTLRKAH EFIKSLQIPE NQPDHENYYR HRSKGSWAHS TIDNGWSVSD STAEAIQALL MLSKISSNLV
501: GDPIKEERLY DAVDCLLSFM NKDGTFSTYE CKRTASLLEV LNPSETFLNI VVDHPSVECT SSATQALVMF RELYPGYRDE EIKNCIKGAS KFIESKQRKD
601: GTWFGTWGVC FTYGTLFAVQ GLVAAGRTYE NSSSIRKACS FLLSKQLSTG GWGETYPSNE TEVYAEATSP HAVNTAWAML ALIYAGQVKR DPTPLYGAAK
701: ELINMQQESG EFPQQVSGPA WTSYRPTISN EEEQVVQDVM WPSEHARARW PTRRGPWAVG LRAGCC
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.