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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024337_P001 Maize cytosol 83.33 87.83
TraesCS4A01G495100.1 Wheat cytosol 84.78 85.34
TraesCS7A01G003500.1 Wheat cytosol 84.78 85.11
Os08t0223900-00 Rice cytosol 87.53 84.97
TraesCS7D01G004000.1 Wheat cytosol 83.33 83.66
HORVU7Hr1G000400.1 Barley cytosol, plastid 80.58 83.31
VIT_09s0054g01200.t01 Wine grape cytosol 7.61 57.43
CDY40048 Canola cytosol 5.91 55.56
EES06259 Sorghum cytosol 54.99 55.35
CDY72111 Canola cytosol 29.92 55.34
EES06258 Sorghum cytosol 54.33 54.4
VIT_11s0065g00030.t01 Wine grape cytosol 54.07 54.35
VIT_09s0054g01160.t01 Wine grape extracellular 7.09 53.47
KRH66676 Soybean cytosol 43.96 53.17
VIT_10s0003g03600.t01 Wine grape cytosol, nucleus, plasma membrane 20.47 52.88
KRG92127 Soybean cytosol 53.15 52.87
KXG29303 Sorghum cytosol 5.64 52.44
KRH41389 Soybean cytosol 52.49 52.42
Bra026038.1-P Field mustard cytosol 51.97 52.31
KRH46975 Soybean endoplasmic reticulum 52.1 52.1
VIT_10s0003g03570.t01 Wine grape cytosol 9.84 52.08
VIT_09s0054g01500.t01 Wine grape cytosol 6.82 52.0
VIT_09s0054g01470.t01 Wine grape cytosol 26.77 51.78
PGSC0003DMT400035250 Potato cytosol 46.98 51.73
CDX87420 Canola cytosol 52.1 51.69
AT1G78970.1 Thale cress cytosol 51.31 51.65
KXG28324 Sorghum cytosol 18.64 51.64
Solyc07g042630.2.1 Tomato cytosol 51.05 51.45
KRH44692 Soybean endoplasmic reticulum 51.44 51.44
KRH10719 Soybean cytosol 30.71 51.32
VIT_09s0054g01220.t01 Wine grape cytosol 50.92 51.26
KXG29446 Sorghum endoplasmic reticulum, extracellular 43.18 51.17
OQU83221 Sorghum cytosol 51.31 51.04
PGSC0003DMT400048796 Potato cytosol 50.92 50.99
KRH66671 Soybean cytosol 50.92 50.92
CDX88493 Canola cytosol 51.97 50.9
AT1G78955.1 Thale cress cytosol 51.31 50.85
Solyc12g006530.1.1 Tomato cytosol 50.66 50.72
VIT_09s0054g01390.t01 Wine grape cytosol 50.92 50.59
VIT_10s0003g03530.t01 Wine grape cytosol 48.16 50.55
AT1G78950.2 Thale cress cytosol, plasma membrane, plastid 50.92 50.52
PGSC0003DMT400043981 Potato cytosol 40.42 50.49
VIT_10s0003g03650.t01 Wine grape cytosol 50.26 50.46
CDY35103 Canola mitochondrion 52.1 50.38
CDX79277 Canola cytosol 45.41 50.36
VIT_09s0054g01410.t01 Wine grape cytosol 50.79 50.33
EER90340 Sorghum cytosol 48.43 50.27
OQU80191 Sorghum cytosol, mitochondrion 49.61 50.2
Solyc12g006510.1.1 Tomato cytosol 49.61 50.13
CDX87419 Canola cytosol 50.26 50.07
VIT_00s0208g00080.t01 Wine grape cytosol, endoplasmic reticulum, golgi 4.2 50.0
VIT_09s0054g01230.t01 Wine grape cytosol 50.39 49.94
Bra035079.1-P Field mustard cytosol 50.13 49.93
PGSC0003DMT400051584 Potato cytosol 49.87 49.93
OQU80182 Sorghum mitochondrion 47.64 49.86
VIT_09s0054g01210.t01 Wine grape cytosol 49.48 49.8
Solyc12g006520.1.1 Tomato cytosol 45.54 49.71
KRH11342 Soybean cytosol 45.14 49.43
VIT_09s0054g01360.t01 Wine grape cytosol, golgi, mitochondrion, plastid 33.2 49.41
Bra003630.1-P Field mustard cytosol 49.74 49.41
AT1G78960.2 Thale cress cytosol 49.48 49.41
CDY57947 Canola cytosol 49.48 49.15
VIT_10s0003g03520.t01 Wine grape cytosol 48.56 49.14
CDX88494 Canola endoplasmic reticulum, plasma membrane 49.87 48.97
AT1G66960.2 Thale cress mitochondrion 49.61 48.96
PGSC0003DMT400048795 Potato cytosol 46.85 48.7
CDY49432 Canola cytosol 45.93 48.14
EES14558 Sorghum cytosol 47.77 48.02
CDY52589 Canola cytosol 45.8 48.01
VIT_09s0054g01140.t01 Wine grape extracellular 12.47 47.98
KXG24790 Sorghum cytosol, mitochondrion 49.87 47.92
EES08419 Sorghum cytosol, mitochondrion, plastid 12.47 47.74
AT1G78500.2 Thale cress cytosol 47.77 47.46
EES17376 Sorghum mitochondrion 46.98 47.23
CDX89540 Canola endoplasmic reticulum, golgi, plastid 31.23 47.13
Bra032185.1-P Field mustard cytosol, plasma membrane, plastid 46.98 47.11
VIT_09s0054g01340.t01 Wine grape cytosol 25.59 47.1
KXG35171 Sorghum extracellular 38.98 47.07
CDY38925 Canola cytosol, nucleus, plasma membrane 45.41 47.01
EES04501 Sorghum cytosol 45.54 46.96
VIT_10s0003g03590.t01 Wine grape cytosol, mitochondrion 6.96 46.9
VIT_10s0003g03660.t01 Wine grape cytosol 48.69 46.9
KXG28793 Sorghum mitochondrion 47.11 46.87
OQU77014 Sorghum cytosol 40.55 46.61
VIT_09s0054g01130.t01 Wine grape cytosol 11.42 46.52
Bra039929.1-P Field mustard cytosol 44.36 46.49
KXG23805 Sorghum cytosol 45.93 46.24
Bra035809.1-P Field mustard cytosol 35.43 46.15
VIT_16s0115g00510.t01 Wine grape cytosol, extracellular, plastid 4.07 45.59
CDY25386 Canola cytosol, plasma membrane, plastid 35.04 45.56
VIT_10s0003g03560.t01 Wine grape cytosol, peroxisome, plastid 16.4 45.45
AT5G36150.1 Thale cress cytosol 45.14 45.26
AT4G15340.1 Thale cress mitochondrion 45.14 44.91
Solyc12g035460.1.1 Tomato cytosol 13.25 44.89
OQU91432 Sorghum cytosol 46.72 44.84
VIT_09s0054g01370.t01 Wine grape cytosol 7.87 44.78
VIT_09s0054g01520.t01 Wine grape cytosol 50.92 44.65
AT3G29255.1 Thale cress cytosol 41.34 44.62
AT4G15370.1 Thale cress cytosol 44.23 44.4
CDY29797 Canola cytosol 43.96 44.02
AT5G48010.2 Thale cress cytosol 44.23 43.99
CDY25392 Canola cytosol 43.83 43.89
CDY20917 Canola cytosol 23.49 43.66
AT5G42600.1 Thale cress cytosol 43.31 43.36
Solyc12g035450.1.1 Tomato cytosol, plasma membrane, plastid 9.71 43.02
VIT_10s0003g03610.t01 Wine grape cytosol 15.88 42.91
VIT_09s0054g01420.t01 Wine grape cytosol, extracellular, golgi 6.04 42.2
CDY20916 Canola cytosol 13.91 41.9
VIT_09s0054g01280.t01 Wine grape cytosol 19.42 41.69
VIT_09s0054g01480.t01 Wine grape cytosol 22.44 40.71
VIT_09s0054g01170.t01 Wine grape cytosol 2.36 40.0
VIT_10s0003g03540.t01 Wine grape cytosol 11.55 39.46
KRH66677 Soybean cytosol 6.96 38.97
CDY08878 Canola cytosol 9.45 38.92
VIT_09s0054g01290.t01 Wine grape cytosol 6.17 36.43
Solyc12g035440.1.1 Tomato cytosol 4.07 35.63
Bra035810.1-P Field mustard cytosol, mitochondrion 6.3 34.29
CDX89541 Canola cytosol 6.3 32.65
CDY34478 Canola cytosol, extracellular 15.88 32.44
CDY63677 Canola cytosol 3.41 27.37
AT1G78480.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 6.82 25.74
Protein Annotations
Gene3D:1.50.10.20EntrezGene:8072161MapMan:9.1.4.3UniProt:C5YIX2EnsemblPlants:EES13537ProteinID:EES13537
ProteinID:EES13537.1GO:GO:0003674GO:GO:0003824GO:GO:0016853GO:GO:0016866PFAM:PF13243
PFAM:PF13249ScanProsite:PS01074PANTHER:PTHR11764PANTHER:PTHR11764:SF17EnsemblPlantsGene:SORBI_3007G078200InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_NSUPFAM:SSF48239unigene:Sbi.12719InterPro:Squalene_cyclaseTIGRFAMs:TIGR01787InterPro:Terpene_synthase_CS
InterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI0001A87563RefSeq:XP_002444042.1SEG:seg::
Description
hypothetical protein
Coordinates
chr7:+:9150329..9159168
Molecular Weight (calculated)
87134.7 Da
IEP (calculated)
7.471
GRAVY (calculated)
-0.281
Length
762 amino acids
Sequence
(BLAST)
001: MWRLKIAKGG PWLKSGNSHI GRETWEFDQD FGSKEEREAV DSAREEFKKN RFQMRHSSDI LARMQLAKEN GFSLDLQKTK DESPLVINSS TVSEILRKAL
101: NYFSAIQAHD GHWPGDFPGP LFTTATMIIV LYVTESLSST LSSEHCKEIC RYLYNRQNMD GGWGLHAEGE SSMLSTALNY TTLRLLGENI DDGPDMSMLK
201: ARKWIHDHGG ATMIPILGKV WLSVLGVFEW SGVNPIPPEL FLLPSWVPIQ PGRLWSHFRM AFIPMCYLYG KKFVGPITRL VMSLREELHI HPYKKIDWKQ
301: ARKLCAKEDV YNPHTWLQEC LSDCLYSFGE PFLTRWPISY MRKKALKQVA EFLKYEDENS QYICIGAAQK ALSMLCCWIE KSNSDAFKRH LARVADFLWI
401: GEDGMKVRVC AGQLWDVAFA VQAILACNIA EEYRSTLKKA HDFIKASQIM DNPSGDFSRK YRHISKGGWG FQVADQGWQV SDCTAEALKV LLMLSKFSSD
501: IGSDQMETCR LYNAVNVLLS LQNPNGGYGT WELARTYPWM EIFNMTEIYA DIMVEHQYVE CTSSVMQALA LFQEKYPWHR KDEIDQCIRG ATEFIEKLQN
601: DDGSWFGSWG ICFTYGTWFA IEGLSAVGQS YGNSTCIRKA CKFLLTKQLN NGGWGESYLS SRTKAYTNLD RQKSHIVNTA WAMLALMKAG QVERDPTPLH
701: KAARLIMSMQ LGNGDFPQEE MIGSFLKNGP LCYMAYRNIF PIWALGEYQK LVLQCDLQRP TF
Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)
001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.