Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87420 | Canola | cytosol | 89.6 | 89.71 |
| CDX88493 | Canola | cytosol | 87.91 | 86.89 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 76.85 | 76.95 |
| AT1G78970.1 | Thale cress | cytosol | 70.87 | 71.99 |
| AT1G78960.2 | Thale cress | cytosol | 71.26 | 71.82 |
| AT1G66960.2 | Thale cress | mitochondrion | 68.79 | 68.52 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 13.91 | 62.21 |
| AT1G78500.2 | Thale cress | cytosol | 58.65 | 58.8 |
| AT2G07050.1 | Thale cress | cytosol | 57.74 | 58.5 |
| AT4G15370.1 | Thale cress | cytosol | 56.44 | 57.18 |
| AT4G15340.1 | Thale cress | mitochondrion | 56.96 | 57.18 |
| Solyc12g035460.1.1 | Tomato | cytosol | 16.52 | 56.44 |
| AT5G42600.1 | Thale cress | cytosol | 55.66 | 56.24 |
| AT5G48010.2 | Thale cress | cytosol | 55.4 | 55.61 |
| AT5G36150.1 | Thale cress | cytosol | 54.49 | 55.13 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 53.45 | 54.29 |
| AT3G29255.1 | Thale cress | cytosol | 49.41 | 53.82 |
| AT3G45130.2 | Thale cress | cytosol | 53.19 | 53.53 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 52.54 | 53.23 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 52.28 | 52.96 |
| EES13537 | Sorghum | cytosol | 50.85 | 51.31 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 48.5 | 50.61 |
| Os08t0223900-00 | Rice | cytosol | 50.85 | 49.81 |
| Zm00001d024337_P001 | Maize | cytosol | 46.42 | 49.38 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 10.4 | 39.6 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:844235 | MapMan:9.1.4.3 | ProteinID:AAC17080.1 | ProteinID:AEE36184.1 | ProteinID:ANM59384.1 |
| ArrayExpress:AT1G78955 | EnsemblPlantsGene:AT1G78955 | RefSeq:AT1G78955 | TAIR:AT1G78955 | RefSeq:AT1G78955-TAIR-G | EnsemblPlants:AT1G78955.1 |
| TAIR:AT1G78955.1 | Unigene:At.52564 | Symbol:CAMS1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| GO:GO:0016866 | GO:GO:0042300 | GO:GO:0090438 | RefSeq:NP_001321747.1 | RefSeq:NP_683508.1 | UniProt:P0C8Y0 |
| PFAM:PF13243 | PFAM:PF13249 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
| SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0000163302 | SEG:seg |
Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
Coordinates
chr1:-:29689013..29694255
Molecular Weight (calculated)
88160.6 Da
IEP (calculated)
6.883
GRAVY (calculated)
-0.300
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.