Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G78970.1 | Thale cress | cytosol | 79.16 | 79.79 |
| AT1G66960.2 | Thale cress | mitochondrion | 78.9 | 77.98 |
| AT1G78955.1 | Thale cress | cytosol | 71.82 | 71.26 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 71.17 | 70.7 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 13.24 | 58.72 |
| AT2G07050.1 | Thale cress | cytosol | 57.8 | 58.1 |
| AT1G78500.2 | Thale cress | cytosol | 57.8 | 57.5 |
| AT5G36150.1 | Thale cress | cytosol | 55.96 | 56.18 |
| AT5G42600.1 | Thale cress | cytosol | 55.83 | 55.98 |
| AT5G48010.2 | Thale cress | cytosol | 56.09 | 55.87 |
| Solyc12g035460.1.1 | Tomato | cytosol | 16.38 | 55.56 |
| AT4G15340.1 | Thale cress | mitochondrion | 55.7 | 55.48 |
| AT3G29255.1 | Thale cress | cytosol | 51.11 | 55.24 |
| AT4G15370.1 | Thale cress | cytosol | 54.91 | 55.2 |
| AT3G45130.2 | Thale cress | cytosol | 52.69 | 52.62 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 51.25 | 51.65 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 50.98 | 51.25 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 50.98 | 51.25 |
| Os08t0223900-00 | Rice | cytosol | 51.38 | 49.94 |
| EES13537 | Sorghum | cytosol | 49.41 | 49.48 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 46.92 | 48.58 |
| Zm00001d024337_P001 | Maize | cytosol | 45.87 | 48.41 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 10.75 | 40.59 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:844236 | MapMan:9.1.4.3 | ProteinID:AAC17070.1 | ProteinID:AEE36185.1 | EMBL:AF003472 |
| EMBL:AK221820 | EMBL:AK230119 | ProteinID:ANM60689.1 | ProteinID:ANM60690.1 | ArrayExpress:AT1G78960 | EnsemblPlantsGene:AT1G78960 |
| RefSeq:AT1G78960 | TAIR:AT1G78960 | RefSeq:AT1G78960-TAIR-G | EnsemblPlants:AT1G78960.2 | Symbol:ATLUP2 | EMBL:AY091131 |
| EMBL:AY114039 | Unigene:At.34204 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016104 | GO:GO:0016853 | GO:GO:0016866 |
| GO:GO:0042300 | RefSeq:NP_001322959.1 | RefSeq:NP_001322960.1 | RefSeq:NP_178017.2 | PFAM:PF13243 | PFAM:PF13249 |
| ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | UniProt:Q8RWT0 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
| SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00000A0992 |
Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
Coordinates
chr1:+:29696394..29701439
Molecular Weight (calculated)
87519.5 Da
IEP (calculated)
6.567
GRAVY (calculated)
-0.251
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.