Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50938 | Canola | cytosol | 93.02 | 92.53 |
| Bra013167.1-P | Field mustard | cytosol | 92.62 | 91.66 |
| CDX93093 | Canola | cytosol | 92.49 | 91.41 |
| CDX85104 | Canola | cytosol | 86.69 | 86.13 |
| CDX77512 | Canola | cytosol | 87.88 | 85.84 |
| VIT_11s0065g00640.t01 | Wine grape | cytosol | 81.69 | 81.58 |
| KRH74134 | Soybean | endoplasmic reticulum | 79.97 | 80.18 |
| PGSC0003DMT400073861 | Potato | mitochondrion | 50.46 | 77.69 |
| Solyc04g070980.2.1 | Tomato | plastid | 75.76 | 75.66 |
| Bra014952.1-P | Field mustard | cytosol | 83.79 | 75.36 |
| EES06259 | Sorghum | cytosol | 75.1 | 75.3 |
| Os02t0139700-01 | Rice | cytosol | 74.18 | 74.18 |
| TraesCS6B01G139000.1 | Wheat | golgi | 74.18 | 74.08 |
| TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 74.04 | 73.95 |
| Zm00001d015234_P002 | Maize | cytosol | 72.73 | 72.44 |
| Zm00001d053889_P004 | Maize | cytosol | 72.46 | 72.37 |
| EES06258 | Sorghum | cytosol | 72.46 | 72.27 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 41.37 | 71.2 |
| Solyc04g050670.1.1 | Tomato | cytosol | 15.15 | 70.99 |
| Os02t0139500-02 | Rice | cytosol | 32.94 | 70.62 |
| TraesCS6D01G099400.2 | Wheat | cytosol | 73.91 | 70.48 |
| HORVU6Hr1G019840.10 | Barley | mitochondrion | 71.94 | 69.03 |
| TraesCS2D01G387000.1 | Wheat | cytosol, plastid | 70.36 | 68.99 |
| TraesCS6A01G110200.1 | Wheat | mitochondrion | 68.25 | 68.7 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 64.43 | 67.92 |
| TraesCS6D01G098800.1 | Wheat | mitochondrion | 68.38 | 67.84 |
| KXG29303 | Sorghum | cytosol | 7.11 | 65.85 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 6.46 | 65.33 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 17.0 | 64.82 |
| TraesCS5A01G004900.1 | Wheat | mitochondrion | 64.43 | 64.43 |
| TraesCS5D01G011800.1 | Wheat | mitochondrion | 64.3 | 64.3 |
| AT3G45130.2 | Thale cress | cytosol | 64.43 | 64.01 |
| TraesCS5D01G006600.1 | Wheat | cytosol | 63.9 | 63.82 |
| TraesCS6A01G110300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 63.37 | 63.54 |
| TraesCS5D01G006700.1 | Wheat | cytosol | 62.85 | 62.76 |
| TraesCS5A01G005900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 52.57 | 62.64 |
| Zm00001d008674_P001 | Maize | mitochondrion | 42.56 | 62.36 |
| GSMUA_Achr7P15800_001 | Banana | cytosol, mitochondrion | 14.49 | 62.15 |
| Zm00001d008671_P001 | Maize | cytosol | 43.08 | 61.7 |
| TraesCS6D01G098600.1 | Wheat | cytosol | 68.91 | 61.6 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 58.89 | 60.16 |
| AT1G78960.2 | Thale cress | cytosol | 58.1 | 57.8 |
| AT1G78955.1 | Thale cress | cytosol | 58.5 | 57.74 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 57.71 | 57.03 |
| AT1G78970.1 | Thale cress | cytosol | 55.86 | 56.01 |
| AT1G66960.2 | Thale cress | mitochondrion | 54.68 | 53.76 |
| AT5G36150.1 | Thale cress | cytosol | 48.88 | 48.82 |
| AT1G78500.2 | Thale cress | cytosol | 49.14 | 48.63 |
| AT4G15340.1 | Thale cress | mitochondrion | 48.75 | 48.3 |
| AT3G29255.1 | Thale cress | cytosol | 44.8 | 48.16 |
| AT4G15370.1 | Thale cress | cytosol | 47.83 | 47.83 |
| AT5G48010.2 | Thale cress | cytosol | 47.43 | 47.0 |
| AT5G42600.1 | Thale cress | cytosol | 46.64 | 46.52 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 8.3 | 31.19 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:815275 | MapMan:9.1.4.3 | MapMan:9.1.5.3 | ProteinID:AAM15015.1 | ProteinID:AEC06032.1 |
| ArrayExpress:AT2G07050 | EnsemblPlantsGene:AT2G07050 | RefSeq:AT2G07050 | TAIR:AT2G07050 | RefSeq:AT2G07050-TAIR-G | EnsemblPlants:AT2G07050.1 |
| TAIR:AT2G07050.1 | EMBL:AY094394 | Unigene:At.10550 | EMBL:BT001118 | Symbol:CAS1 | CHEMBL:CHEMBL5356 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009987 | GO:GO:0010027 | GO:GO:0016043 | GO:GO:0016853 |
| GO:GO:0016866 | GO:GO:0016871 | GO:GO:0019745 | RefSeq:NP_178722.1 | UniProt:P38605 | PFAM:PF13243 |
| PFAM:PF13249 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF27 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| EMBL:U02555 | UniParc:UPI0000001AFD | SEG:seg | : | : | : |
Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
Coordinates
chr2:+:2924360..2930751
Molecular Weight (calculated)
86037.9 Da
IEP (calculated)
6.009
GRAVY (calculated)
-0.243
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.