Factsheet for TraesCS6D01G098800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G110200.1	Wheat	mitochondrion	93.73	95.09
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	86.8	87.71
TraesCS6D01G098600.1	Wheat	cytosol	95.16	85.75
Os02t0139500-02	Rice	cytosol	38.04	82.2
GSMUA_Achr7P15790_001	Banana	cytosol	58.56	73.81
TraesCS2D01G387000.1	Wheat	cytosol, plastid	73.86	73.0
TraesCS6D01G099400.2	Wheat	cytosol	75.82	72.86
KRH74134	Soybean	endoplasmic reticulum	69.15	69.88
VIT_11s0065g00640.t01	Wine grape	cytosol	68.89	69.34
TraesCS5D01G011800.1	Wheat	mitochondrion	68.37	68.91
TraesCS5D01G006600.1	Wheat	cytosol	68.24	68.68
AT2G07050.1	Thale cress	cytosol	67.84	68.38
TraesCS5D01G006700.1	Wheat	cytosol	67.58	68.03
PGSC0003DMT400073861	Potato	mitochondrion	43.79	67.95
CDY50938	Canola	cytosol	67.19	67.37
Bra013167.1-P	Field mustard	cytosol	67.45	67.28
CDX93093	Canola	cytosol	67.32	67.06
CDX85104	Canola	cytosol	66.41	66.49
VIT_09s0054g01250.t01	Wine grape	cytosol	25.75	66.33
CDX77512	Canola	cytosol	67.32	66.28
VIT_09s0018g00630.t01	Wine grape	cytosol	65.23	65.83
VIT_09s0054g01550.t01	Wine grape	cytosol	65.1	65.7
VIT_09s0054g01180.t01	Wine grape	cytosol	55.03	65.47
VIT_09s0054g01120.t01	Wine grape	cytosol	59.87	64.33
Solyc04g070980.2.1	Tomato	plastid	63.79	64.21
VIT_09s0054g01110.t01	Wine grape	cytosol	65.62	63.07
TraesCS7D01G173600.1	Wheat	cytosol	42.09	59.96
Bra014952.1-P	Field mustard	cytosol	64.71	58.65
Solyc04g050670.1.1	Tomato	cytosol	12.42	58.64
TraesCS7D01G233100.2	Wheat	mitochondrion	57.39	58.46
TraesCS6D01G099900.1	Wheat	cytosol	15.56	57.77
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.97	55.88
TraesCS6D01G100000.1	Wheat	mitochondrion	54.64	54.43
TraesCS6D01G006500.1	Wheat	cytosol	47.32	54.27
TraesCS7D01G004000.1	Wheat	cytosol	52.94	53.36
VIT_09s0054g01090.t01	Wine grape	cytosol	65.88	53.11
TraesCS4D01G000600.2	Wheat	mitochondrion	52.16	52.92
TraesCS7D01G001800.3	Wheat	mitochondrion	29.93	52.89
VIT_04s0008g03000.t01	Wine grape	cytosol	20.39	50.81
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.8	48.08
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	13.86	47.11
VIT_04s0008g02990.t01	Wine grape	cytosol	5.62	45.74
PGSC0003DMT400048787	Potato	cytosol	3.27	43.1
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.2	40.41
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.91	37.21
CDY29789	Canola	cytosol	4.31	33.67

Protein Annotations

EnsemblPlants:TraesCS6D01G098800.1	EnsemblPlantsGene:TraesCS6D01G098800	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SEG:seg	SUPFAM:SSF48239
TIGR:cd02892	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	MapMan:9.1.5.3	:	:

Description

No Description!

Coordinates

chr6D:-:62192963..62206332

Molecular Weight (calculated)

86971.6 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.295

Length

765 amino acids

Sequence
(BLAST)

001: MWRLRIGEEA GGQPWLRTTN AHAGRQVWEF DPAAAGALDD VHNARREYSS RRHQLKHSAD RLMRLQFAEL TAPKLDIPGI KLQEHEDVTE EAVLTSLKRA
101: IGQLSTLQAY DGHWPGDIAG PMFLLPGLVI ALHSTGALNT VLSSEHQKEI RRYLYNHQNK DGGWGLHIEG PSTMFASVLN YVTLRLLREG SDSEDGAIQL
201: AQNWILDHGG ATFATSWGKF WLSVLGVFDW SGNNPLLPEL WLLPYCLPFH PGRMWSHCRM VYFPMSYIYG KRFVGPITPT VLNLRKELYK VPYDEIDWDK
301: ARNQCAKEDL YCPHPLGQDI LWTTLHKFVE PVLSHWPGSK LREKALKNAM QHIHYEDENT QYVCSGAVGK VLNMLCCWIE DPNSEEFKLH IPRIYDYLWV
401: AEDGMKMQGY NGSQLWDTAL TVEAILATEL TEEFRPTLKL AHDYIKNSQI LHDCHGDLSV WYRHISKGAW TFSTADHAWP VSDCTALGLK ASLLLSKISP
501: KMVGVSIEAN RLYDAVNCLL SWMNGNGGFA SYELTRSYAW MEFLNPSEIF GDIMIDHPVV ECTSEVIQAL TTFRKHYPGH RREEIDKCIH KAENFIGSIQ
601: RNDGSWYGSW AICFTYGTWY AVRGLVAAGR TFKNCHAIRK ACDFLLSKEV PSGGWGESYL SCRDKVYTEL EGRRPHVVNT SWAMLALIDA GQAERDPGPL
701: HRAAKVLINL QLEDGEFPQQ EIIGIFARNC TITYSQYRNI FPIWALGEYC CRVLGSRSPE EHGDA

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.