Factsheet for GSMUA_Achr7P15790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G407200.1	Wheat	cytosol	9.72	78.67
KXG29303	Sorghum	cytosol	10.05	74.39
TraesCS6A01G110800.1	Wheat	cytosol, golgi	80.4	64.21
Os02t0139700-01	Rice	cytosol	80.23	64.16
TraesCS6B01G139000.1	Wheat	golgi	80.07	63.95
EES06259	Sorghum	cytosol	79.57	63.8
Zm00001d053889_P004	Maize	cytosol	79.74	63.68
Zm00001d015234_P002	Maize	cytosol	79.74	63.52
TraesCS6B01G138500.1	Wheat	cytosol	74.3	62.64
EES06258	Sorghum	cytosol	77.59	61.89
HORVU6Hr1G019840.10	Barley	mitochondrion	79.9	61.31
TraesCS6D01G099400.2	Wheat	cytosol	80.4	61.31
TraesCS2D01G387000.1	Wheat	cytosol, plastid	76.77	60.21
Zm00001d008671_P001	Maize	cytosol	51.57	59.06
Os02t0139500-02	Rice	cytosol	34.43	59.04
TraesCS6A01G110200.1	Wheat	mitochondrion	73.31	59.02
TraesCS6D01G098800.1	Wheat	mitochondrion	73.81	58.56
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	58.32	55.57
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	67.87	54.43
TraesCS5D01G011800.1	Wheat	mitochondrion	67.55	54.02
TraesCS5A01G004900.1	Wheat	mitochondrion	67.38	53.89
TraesCS5D01G006600.1	Wheat	cytosol	67.05	53.55
TraesCS6D01G098600.1	Wheat	cytosol	74.63	53.36
TraesCS5D01G006700.1	Wheat	cytosol	65.4	52.24
TraesCS2B01G407300.1	Wheat	cytosol	37.56	51.7
Zm00001d008674_P001	Maize	mitochondrion	43.33	50.77
TraesCS5B01G004800.1	Wheat	cytosol	61.61	50.34
EES08419	Sorghum	cytosol, mitochondrion, plastid	8.4	25.63
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	0.99	3.39

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	EnsemblPlantsGene:GSMUA_Achr7G15790_001	EnsemblPlants:GSMUA_Achr7P15790_001	EnsemblPlants:GSMUA_Achr7T15790_001	UniProt:M0THW6	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00029545CC

Description

Cycloartenol synthase [Source:GMGC_GENE;Acc:GSMUA_Achr7G15790_001]

Coordinates

chr7:-:12694629..12712452

Molecular Weight (calculated)

68895.5 Da

IEP (calculated)

6.549

GRAVY (calculated)

-0.227

Length

607 amino acids

Sequence
(BLAST)

001: MNHALQNKDG GWGLHIEGTS TMFGTALTYV ILRLLGEGSD GGFGAMEKGR NWILDHGSAT AITSWGKMWL SVLGVFDWSG NNPLPPEMWL LPYFLPVHPG
101: RMWCHCRMVY LPMSYIYGKR FVGPITPTVV SLRTELYNIP YDQIDWNQAR NECAKEDLYY PHPLIQDILW ASLHKIVEPI LMHWPGNKLR EKAINTAMQH
201: IHYEDENTRY ICIGPVNKVL NMLCCWIEEP NSEAFKLHLP RVSDYLWVAE DGMKMQGYNG SQLWDTAFTV QAIISTNLSE EFGPTLKKAH EFVKNTQVLE
301: DCPGDLNSWY RHISKGAWPF STADHGWPIS DCTAEGLKAS LLLSKISPEI VGYQIDGRKL YDAVNVILSL MNQDGGFATY ELTRSYAWLE IINPAETFGD
401: IVIDYPYVEC TSAAIQALTS FKKLYPGHRR EEIDNCITKS ARFIEKIQQA DGSWYGSWGV CFTYGIWFGV KGLVAAGRTY ESSSCIRKSC NFLLSKQLAS
501: GGWGESYLSC QDKVYTNIEG NRTHAVNTGW AMLTLIDAGQ CERDPKPLHR AAKVLINMQM ENGEFPQQEI MGVFNRNCMI SYSAYRNIFP IWALGEYRSR
601: VLCPKNN

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.