Factsheet for TraesCS6D01G099400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G139000.1	Wheat	golgi	94.1	98.55
TraesCS6A01G110800.1	Wheat	cytosol, golgi	93.59	98.03
HORVU6Hr1G019840.10	Barley	mitochondrion	91.08	91.66
EES06259	Sorghum	cytosol	83.92	88.24
Os02t0139700-01	Rice	cytosol	82.41	86.43
Zm00001d053889_P004	Maize	cytosol	80.9	84.74
Zm00001d015234_P002	Maize	cytosol	80.9	84.51
EES06258	Sorghum	cytosol	80.4	84.1
GSMUA_Achr7P15790_001	Banana	cytosol	61.31	80.4
TraesCS2D01G387000.1	Wheat	cytosol, plastid	77.14	79.33
TraesCS6D01G098800.1	Wheat	mitochondrion	72.86	75.82
KRH74134	Soybean	endoplasmic reticulum	70.98	74.64
AT2G07050.1	Thale cress	cytosol	70.48	73.91
PGSC0003DMT400073861	Potato	mitochondrion	45.6	73.63
CDY50938	Canola	cytosol	70.35	73.39
VIT_11s0065g00640.t01	Wine grape	cytosol	69.97	73.29
Bra013167.1-P	Field mustard	cytosol	70.35	73.01
CDX93093	Canola	cytosol	70.35	72.92
VIT_09s0018g00630.t01	Wine grape	cytosol	68.59	72.03
VIT_09s0054g01550.t01	Wine grape	cytosol	68.59	72.03
Solyc04g070980.2.1	Tomato	plastid	68.47	71.71
VIT_09s0054g01180.t01	Wine grape	cytosol	57.79	71.54
CDX85104	Canola	cytosol	68.22	71.07
VIT_09s0054g01120.t01	Wine grape	cytosol	63.57	71.07
CDX77512	Canola	cytosol	69.22	70.91
VIT_09s0054g01250.t01	Wine grape	cytosol	26.26	70.37
TraesCS5D01G011800.1	Wheat	mitochondrion	66.71	69.96
VIT_09s0054g01110.t01	Wine grape	cytosol	69.1	69.1
TraesCS5D01G006600.1	Wheat	cytosol	65.58	68.68
TraesCS6D01G098600.1	Wheat	cytosol	73.12	68.55
TraesCS5D01G006700.1	Wheat	cytosol	64.7	67.76
Solyc04g050670.1.1	Tomato	cytosol	13.57	66.67
Bra014952.1-P	Field mustard	cytosol	66.71	62.91
TraesCS6D01G099900.1	Wheat	cytosol	15.7	60.68
TraesCS7D01G233100.2	Wheat	mitochondrion	56.53	59.92
TraesCS7D01G173600.1	Wheat	cytosol	40.2	59.59
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.03	58.82
VIT_09s0054g01090.t01	Wine grape	cytosol	69.72	58.48
TraesCS6D01G100000.1	Wheat	mitochondrion	54.4	56.38
TraesCS6D01G006500.1	Wheat	cytosol	46.73	55.77
TraesCS7D01G001800.3	Wheat	mitochondrion	30.03	55.2
TraesCS4D01G000600.2	Wheat	mitochondrion	51.88	54.77
TraesCS7D01G004000.1	Wheat	cytosol	51.88	54.41
VIT_04s0008g03000.t01	Wine grape	cytosol	20.98	54.4
PGSC0003DMT400048787	Potato	cytosol	3.77	51.72
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	14.45	51.11
VIT_04s0008g02990.t01	Wine grape	cytosol	5.65	47.87
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.3	47.44
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.8	44.56
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.35	37.67
CDY29789	Canola	cytosol	3.77	30.61

Protein Annotations

EnsemblPlants:TraesCS6D01G099400.2	EnsemblPlantsGene:TraesCS6D01G099400	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SEG:seg	SUPFAM:SSF48239
TIGR:cd02892	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	MapMan:9.1.5.3	:	:

Description

No Description!

Coordinates

chr6D:-:62499805..62510049

Molecular Weight (calculated)

89977.6 Da

IEP (calculated)

6.382

GRAVY (calculated)

-0.233

Length

796 amino acids

Sequence
(BLAST)

001: MWRLKIAEGG ADPWLRTKNA HVGRQVWEFD AAADDPDALA AVDAARREFA ARRHQLKHSA DLPMRIQLAK ENPLKLDLPA IKLGENEDVT EEAVSTTLRR
101: ALSTFSTLQA HDGHWPGDYG GPMFLMPGLL IMLHVTGALN TVLSSEHQKE IRRYLYNHQN EDGGWGLHIE GPSTMFGSAL TYVSLRLLGE GPDSGDGAME
201: KGRNWILDHG GATYITSWGK FWLAVLGVFD WSGNNPLPPE TWMLPYCLPV HPGRMWCHCR MVYLPMCYVY GKRFVGRITP IILELRNELF KVPYSEVDWD
301: SARNLCAKED LYYPHPLIQD ILWATLHKFV EPVMMHWPGN KLREKSLNHV MQHVHYEDEN TRYICIGPVN KVLNMLACWI EDPNSEAFKL HIPRIYDYLW
401: VAEDGMKMQG YNGSQLWDTA FAVQAIAATD LIEEFAPTLK LAHDFIKNSQ VVDDCPGDLS YWYRHISKGA WPFSTADHGW PISDCTAEGL KASLLLSKIS
501: PEIVGESVEV NRLYDAVNCL MSWMIQGLRI LLGTLPCILS SNNGLFDRQF INNNGSSILV NENGGFATYE LQRSYAWLEL INPAETFGDI VIDYPYVECT
601: SAAIQALTSF KKLYPGHRRK DVDNCINKAA SYIESIQRKD GSWYGSWAVC FTYGTWFGVK GLLAAGRTFK SSPAIRKACD FLMSKELPFG GWGESYLSSQ
701: DQVYTNLEGK HTHAVNTGWA MLTLIDAGQA ERDPTPLHRA AKVLINLQSE DGEFPQQEIM GVFNKNCMIS YSQYRNIFPI WALGEYRCRV LGAAKK

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.