Factsheet for PGSC0003DMT400062376

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
vacuole 4
plasma membrane 4
golgi 4
plastid 2
extracellular 4
endoplasmic reticulum 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	golgi, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	21.76	61.76
PGSC0003DMT400048787	Potato	cytosol	15.54	51.72
KXG29303	Sorghum	cytosol	17.1	40.24
TraesCS2B01G407200.1	Wheat	cytosol	15.54	40.0
VIT_04s0008g02980.t01	Wine grape	mitochondrion	24.87	30.77
PGSC0003DMT400048796	Potato	cytosol	50.26	12.75
PGSC0003DMT400051584	Potato	cytosol	47.15	11.96
PGSC0003DMT400035250	Potato	cytosol	41.97	11.71
TraesCS5D01G006700.1	Wheat	cytosol	45.6	11.58
TraesCS5B01G004800.1	Wheat	cytosol	44.56	11.57
PGSC0003DMT400073861	Potato	mitochondrion	29.02	11.36
TraesCS6B01G139000.1	Wheat	golgi	44.56	11.32
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	10.36	11.3
Os02t0139700-01	Rice	cytosol	44.04	11.2
TraesCS6A01G110800.1	Wheat	cytosol, golgi	44.04	11.18
EES06259	Sorghum	cytosol	43.52	11.1
TraesCS5D01G006600.1	Wheat	cytosol	43.52	11.05
EES06258	Sorghum	cytosol	43.52	11.04
TraesCS5D01G011800.1	Wheat	mitochondrion	43.01	10.94
TraesCS5A01G004900.1	Wheat	mitochondrion	43.01	10.94
Zm00001d015234_P002	Maize	cytosol	43.01	10.89
TraesCS6D01G099400.2	Wheat	cytosol	44.56	10.8
Zm00001d053889_P004	Maize	cytosol	41.97	10.66
HORVU6Hr1G019840.10	Barley	mitochondrion	43.01	10.49
TraesCS2D01G387000.1	Wheat	cytosol, plastid	41.97	10.47
TraesCS6A01G110200.1	Wheat	mitochondrion	40.41	10.34
Zm00001d008674_P001	Maize	mitochondrion	27.46	10.23
TraesCS6D01G098800.1	Wheat	mitochondrion	40.41	10.2
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	39.9	10.17
TraesCS6B01G138500.1	Wheat	cytosol	37.82	10.14
EES08419	Sorghum	cytosol, mitochondrion, plastid	10.36	10.05
PGSC0003DMT400048795	Potato	cytosol	37.31	9.82
Zm00001d008671_P001	Maize	cytosol	26.42	9.62
VIT_04s0008g03000.t01	Wine grape	cytosol	15.03	9.45
TraesCS6D01G098600.1	Wheat	cytosol	40.93	9.31
TraesCS2B01G407300.1	Wheat	cytosol	19.17	8.39
Os02t0139500-02	Rice	cytosol	15.03	8.19
VIT_09s0054g01250.t01	Wine grape	cytosol	11.4	7.41
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	24.35	7.38
PGSC0003DMT400043981	Potato	cytosol	21.76	6.89
CDY29789	Canola	cytosol	3.11	6.12
VIT_04s0008g02990.t01	Wine grape	cytosol	2.59	5.32
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	9.84	4.42

Protein Annotations

EnsemblPlants:PGSC0003DMT400062376	EnsemblPlantsGene:PGSC0003DMG400024276	Gene3D:1.50.10.20	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16
PGSC:PGSC0003DMG400024276	SUPFAM:SSF48239	UniParc:UPI0002954E12	UniProt:M1C901	MapMan:35.1	:

Description

Beta-Amyrin Synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400024276]

Coordinates

chr12:-:5645035..5649467

Molecular Weight (calculated)

22161.6 Da

IEP (calculated)

8.319

GRAVY (calculated)

0.218

Length

193 amino acids

Sequence
(BLAST)

001: MLYKLLQFMI AKAPWYVECT GASIQALVLF KKLYPGHRTT EIDNFIDNAV KYLDDVQKPD GSWFMIFFLR VLELSALPIH MTRLIMSTGM VPRVCALHMF
101: PGLLLEGLLQ QARVTSTLQL FVKALNFCYE DKGLMVVDRD PRPLHRAARL LINSQMEDGD FPQQEITGVV MKNCMLHYAA YRNIFPLWPV GFG

Best Arabidopsis Sequence Match ( AT1G78955.5 )
(BLAST)

001: MFCTTLNYIC MRILGEGPNG GPGNACKRAR DWILDHGGAT YIPSWGKTWL SILGVFDWSG SNPMPPEFWI LPSFLPIHPA KMWCYCRLVY MPMSYLYGKR
101: FVGPISPLIL QLREEIYLQP YAKINWNRAR HLCAKEDAYC PHPQIQDVIW NCLYIFTEPF LACWPFNKLL REKALGVAMK HIHYEDENSR YITIGCVEKA
201: LCMLACWVED PNGIHFKKHL LRISDYLWIA EDGMKMQSFG SQLWDSGFAL QALVASNLVN EIPDVLRRGY DFLKNSQVRE NPSGDFTNMY RHISKGSWTF
301: SDRDHGWQAS DCTAESFKCC LLLSMIPPDI VGPKMDPEQL YEAVTILLSL QSKNGGVTAW EPARGQEWLE LLNPTEVFAD IVVEHEYNEC TSSAIQALIL
401: FKQLYPNHRT EEINTSIKKA VQYIESIQML DGSWYGSWGV CFTYSTWFGL GGLAAAGKTY NNCLAMRKGV HFLLTTQKDN GGWGESYLSC PKKRYIPSEG
501: ERSNLVQTSW AMMGLLHAGQ AERDPSPLHR AAKLLINSQL ENGDFPQQEI TGAFMKNCLL HYAAYRNIFP VWALAEYRRR VPLPYEKPST ERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.