Factsheet for TraesCS2D01G387000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G099400.2	Wheat	cytosol	79.33	77.14
GSMUA_Achr7P15790_001	Banana	cytosol	60.21	76.77
TraesCS6D01G098800.1	Wheat	mitochondrion	73.0	73.86
KRH74134	Soybean	endoplasmic reticulum	70.03	71.6
PGSC0003DMT400073861	Potato	mitochondrion	44.83	70.39
AT2G07050.1	Thale cress	cytosol	68.99	70.36
VIT_11s0065g00640.t01	Wine grape	cytosol	68.48	69.74
CDY50938	Canola	cytosol	68.35	69.33
Bra013167.1-P	Field mustard	cytosol	68.35	68.97
CDX93093	Canola	cytosol	68.35	68.88
VIT_09s0018g00630.t01	Wine grape	cytosol	66.8	68.21
VIT_09s0054g01550.t01	Wine grape	cytosol	66.8	68.21
TraesCS5D01G011800.1	Wheat	mitochondrion	66.8	68.12
CDX85104	Canola	cytosol	67.18	68.06
CDX77512	Canola	cytosol	68.09	67.83
TraesCS5D01G006600.1	Wheat	cytosol	66.15	67.37
VIT_09s0054g01180.t01	Wine grape	cytosol	55.94	67.34
VIT_09s0054g01120.t01	Wine grape	cytosol	61.89	67.28
TraesCS6D01G098600.1	Wheat	cytosol	73.64	67.14
Solyc04g070980.2.1	Tomato	plastid	65.89	67.11
VIT_09s0054g01250.t01	Wine grape	cytosol	25.71	67.0
TraesCS5D01G006700.1	Wheat	cytosol	65.63	66.84
VIT_09s0054g01110.t01	Wine grape	cytosol	67.96	66.08
Solyc04g050670.1.1	Tomato	cytosol	13.05	62.35
Bra014952.1-P	Field mustard	cytosol	65.25	59.83
TraesCS6D01G099900.1	Wheat	cytosol	15.89	59.71
TraesCS7D01G173600.1	Wheat	cytosol	40.05	57.73
TraesCS7D01G233100.2	Wheat	mitochondrion	55.68	57.39
VIT_09s0054g01090.t01	Wine grape	cytosol	67.83	55.32
TraesCS6D01G100000.1	Wheat	mitochondrion	54.78	55.21
TraesCS4D01G000600.2	Wheat	mitochondrion	52.97	54.38
TraesCS6D01G006500.1	Wheat	cytosol	46.38	53.82
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.65	52.94
TraesCS7D01G004000.1	Wheat	cytosol	51.68	52.7
TraesCS7D01G001800.3	Wheat	mitochondrion	29.07	51.96
VIT_04s0008g03000.t01	Wine grape	cytosol	20.03	50.49
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	13.57	46.67
PGSC0003DMT400048787	Potato	cytosol	3.36	44.83
VIT_04s0008g02990.t01	Wine grape	cytosol	5.43	44.68
VIT_04s0008g02980.t01	Wine grape	mitochondrion	8.79	43.59
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.47	41.97
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.41	36.74
CDY29789	Canola	cytosol	4.39	34.69

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS2D01G387000
EnsemblPlants:TraesCS2D01G387000.1	TIGR:cd02892	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:492054619..492075235

Molecular Weight (calculated)

87898.7 Da

IEP (calculated)

6.761

GRAVY (calculated)

-0.336

Length

774 amino acids

Sequence
(BLAST)

001: MAEIRPSQPR AKKISNRKSK HRPWLRTTNG YLGRQVWEFD AAVEPDPEEV DAVEAARQGF VARRHQLKHS ADLVMRNQFA KANPLELDLP AVKLEEHEDV
101: TEEVVSTTLK RAISRLSTLQ AHDGHWPGDY GGPMFLMPGL IITLYVTGAL NTVLSSEHQI EIRRYLYNHQ NGDGGWGLHI EGPSTMFGSA LTYVSLRLLG
201: ERTDSGYGAM EKGRNWILDH GGATFVTSWG KFRLSVLGVF DWSGNNPVPP EAWLLPYCLP FHPGRMWCHC RMVYLPMCYI YGKRFVGQVT PLVLELRKEL
301: YKGPYNEIDW DKTRNQCAKE DLYYPHPFVQ DILWATLHKF VEPLMMHWPA SKLREKALET AMKHIHYEDE NTRYICIGPV NKVMNMLACW IEDQNSEAFK
401: LHIPRVYDYL WIAEDGMKMQ GYNGSQLWDT AFTVQAIVAT NLIEEFGPTL KLAHEYIKNS QVLDDSPGEQ KDWYRHISKG AWSYSTADSW PISDCTAEGL
501: KASLLLAKIS PQVVGDPLED NRLYDALNCL MSYMNDNGGF ASYELTRAYT WLEIINPSET FGDIVTDYPY VECTSAAIQA LTLFRKFYPG HLRKEVDNCI
601: SKAANFIESI QKSDGSWYGS WAVCFTYGTW FGVKGLTAVG RTFKNSPAIR KACEFLLSKE LPSGGWGESY LSSQDQVYTN LEGKRAHAVN TSWAMLALID
701: AGQAARDPSP LHRAAKVLIN LQSVDGEFPQ QEIIGVFNKN CTISNSQYRN IFPIWALGEY RCRVLAPGNY SLRS

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.