CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013167.1-P	Field mustard	cytosol	99.22	99.35
CDY50938	Canola	cytosol	98.05	98.69
AT2G07050.1	Thale cress	cytosol	91.41	92.49
CDX85104	Canola	cytosol	86.33	86.78
CDX77512	Canola	cytosol	87.76	86.74
CDX85103	Canola	cytosol	11.46	83.02
VIT_11s0065g00640.t01	Wine grape	cytosol	79.43	80.26
KRH74134	Soybean	endoplasmic reticulum	78.26	79.39
PGSC0003DMT400073861	Potato	mitochondrion	49.48	77.08
Solyc04g070980.2.1	Tomato	plastid	74.48	75.26
Os02t0139700-01	Rice	cytosol	73.83	74.7
EES06259	Sorghum	cytosol	73.44	74.5
TraesCS6A01G110800.1	Wheat	cytosol, golgi	73.31	74.08
TraesCS6B01G139000.1	Wheat	golgi	73.18	73.95
Zm00001d015234_P002	Maize	cytosol	70.96	71.52
Zm00001d053889_P004	Maize	cytosol	70.7	71.45
EES06258	Sorghum	cytosol	70.7	71.35
Solyc04g050670.1.1	Tomato	cytosol	14.84	70.37
TraesCS6D01G099400.2	Wheat	cytosol	72.92	70.35
TraesCS2B01G407300.1	Wheat	cytosol	40.1	69.84
Os02t0139500-02	Rice	cytosol	32.03	69.49
HORVU6Hr1G019840.10	Barley	mitochondrion	71.22	69.15
TraesCS2D01G387000.1	Wheat	cytosol, plastid	68.88	68.35
TraesCS6A01G110200.1	Wheat	mitochondrion	67.06	68.3
TraesCS6B01G138500.1	Wheat	cytosol	63.54	67.78
TraesCS6D01G098800.1	Wheat	mitochondrion	67.06	67.32
TraesCS5D01G011800.1	Wheat	mitochondrion	64.19	64.95
TraesCS5A01G004900.1	Wheat	mitochondrion	64.06	64.82
TraesCS5D01G006600.1	Wheat	cytosol	63.67	64.34
TraesCS5D01G006700.1	Wheat	cytosol	63.15	63.82
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	52.73	63.58
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	62.5	63.41
CDY40048	Canola	cytosol	6.51	61.73
TraesCS6D01G098600.1	Wheat	cytosol	67.97	61.48
Zm00001d008674_P001	Maize	mitochondrion	41.41	61.39
TraesCS2B01G407200.1	Wheat	cytosol	5.99	61.33
Zm00001d008671_P001	Maize	cytosol	42.32	61.32
KXG29303	Sorghum	cytosol	6.51	60.98
EES08419	Sorghum	cytosol, mitochondrion, plastid	15.76	60.8
TraesCS5B01G004800.1	Wheat	cytosol	58.72	60.7
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	13.8	59.89
CDX87419	Canola	cytosol	58.46	58.69
CDY72111	Canola	cytosol	30.99	57.77
CDX79277	Canola	cytosol	51.17	57.21
CDY57947	Canola	cytosol	56.9	56.98
CDX88494	Canola	endoplasmic reticulum, plasma membrane	57.29	56.7
CDX87420	Canola	cytosol	55.73	55.73
CDX88493	Canola	cytosol	55.73	55.01
CDY35103	Canola	mitochondrion	55.21	53.81
CDY49432	Canola	cytosol	47.27	49.93
CDY52589	Canola	cytosol	47.14	49.79
CDY20916	Canola	cytosol	16.28	49.41
CDY20917	Canola	cytosol	26.17	49.02
CDY38925	Canola	cytosol, nucleus, plasma membrane	46.35	48.37
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	31.12	47.33
CDY25386	Canola	cytosol, plasma membrane, plastid	35.29	46.25
CDY25392	Canola	cytosol	45.05	45.47
CDY29797	Canola	cytosol	44.92	45.34
CDY08878	Canola	cytosol	10.29	42.7
CDX89541	Canola	cytosol	7.81	40.82
CDY34478	Canola	cytosol, extracellular	16.8	34.58
CDY29789	Canola	cytosol	4.3	33.67
CDY63677	Canola	cytosol	3.26	26.32

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	GO:A0A078E0L3	EnsemblPlants:CDX93093	ProteinID:CDX93093
ProteinID:CDX93093.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866	EnsemblPlantsGene:GSBRNA2T00155004001	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EE32A9

Description

BnaA03g38150D

Coordinates

chrLK031874:-:1151282..1156695

Molecular Weight (calculated)

86908.8 Da

IEP (calculated)

6.375

GRAVY (calculated)

-0.269

Length

768 amino acids

Sequence
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWDFDP NLGTPEELAA VEEARKSFRE NRFAKKHSSD LLMRLQFSRE SLSRQVLPQV NIKDGDDVTE KMVETTLKRG
101: VDFYSTIQAS DGHWAGDYGG PMFLLPGLII TLSITGALNT VLSEQHKAEM RRYLHNHQAN THYLLILNED GGWGLHIEGP STMFGSVLNY VTLRLLGEGP
201: NDGDGAMEKG RDWILNHGGA TNITSWGKMW LSVLGAFEWS GNNPLPPEIW LLPYILPIHP GRMWCHCRMV YLPMSYLYGK RFVGPITSTV LSLRKELFTV
301: PYHEVDWNEA RNLCAKEDLY YPHPLVQDIL WASLHKIVEP VLTRWPGANL REKALRTTLE HIHYEDENTR YICIGPVNKV LNMLCCWVED PNSEAFKLHL
401: PRIHDYLWVA EDGMKMQGYN GSQLWDTSFA VQAVLATNLV EEYGPVLKKA HSYVKNSQVS EDCPGDLSYW YRHISKGAWP FSTADHGWPI SDCTAEGLKA
501: ALLLSKVPKE IVGEPVDTKR LYDAVNVIIS LQNADGGFAT YELTRSYPWL ELINPAETFG DIVIDYPYVE CTSAAIQALV AFRKLYPGHR KKEVDECIEK
601: AVKFIESIQE SDGSWYGSWA VCFTYGTWFG VKGLEAAGKT LKNSPTVAKA CEFLLSKQLP SGGWGESYLS CQDKVYSNLE GNRSHVVNTA WALLSLIGAG
701: QVEVDQKPLH RAARYLINAQ MESGDFPQQE IMGVFNRNCM ITYAAYRNIF PIWALGEYRS KVLLQQGE

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.