Factsheet for Bra013167.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93093	Canola	cytosol	99.35	99.22
CDY50938	Canola	cytosol	98.17	98.69
AT2G07050.1	Thale cress	cytosol	91.66	92.62
VIT_11s0065g00640.t01	Wine grape	cytosol	79.53	80.26
KRH74134	Soybean	endoplasmic reticulum	78.36	79.39
PGSC0003DMT400073861	Potato	mitochondrion	49.54	77.08
Bra014952.1-P	Field mustard	cytosol	83.57	75.95
Solyc04g070980.2.1	Tomato	plastid	74.58	75.26
Os02t0139700-01	Rice	cytosol	73.92	74.7
EES06259	Sorghum	cytosol	73.53	74.5
TraesCS6A01G110800.1	Wheat	cytosol, golgi	73.4	74.08
TraesCS6B01G139000.1	Wheat	golgi	73.27	73.95
Zm00001d015234_P002	Maize	cytosol	71.06	71.52
EES06258	Sorghum	cytosol	70.93	71.48
Zm00001d053889_P004	Maize	cytosol	70.8	71.45
Solyc04g050670.1.1	Tomato	cytosol	14.86	70.37
TraesCS6D01G099400.2	Wheat	cytosol	73.01	70.35
TraesCS2B01G407300.1	Wheat	cytosol	40.16	69.84
Os02t0139500-02	Rice	cytosol	32.2	69.77
HORVU6Hr1G019840.10	Barley	mitochondrion	71.32	69.15
TraesCS6A01G110200.1	Wheat	mitochondrion	67.28	68.44
TraesCS2D01G387000.1	Wheat	cytosol, plastid	68.97	68.35
TraesCS6B01G138500.1	Wheat	cytosol	63.62	67.78
TraesCS6D01G098800.1	Wheat	mitochondrion	67.28	67.45
TraesCS5D01G011800.1	Wheat	mitochondrion	64.41	65.09
TraesCS5A01G004900.1	Wheat	mitochondrion	64.28	64.95
TraesCS5D01G006600.1	Wheat	cytosol	63.89	64.47
TraesCS5D01G006700.1	Wheat	cytosol	63.23	63.82
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	52.8	63.58
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	62.71	63.54
TraesCS6D01G098600.1	Wheat	cytosol	68.19	61.6
Zm00001d008674_P001	Maize	mitochondrion	41.59	61.58
TraesCS2B01G407200.1	Wheat	cytosol	6.0	61.33
Zm00001d008671_P001	Maize	cytosol	42.24	61.13
KXG29303	Sorghum	cytosol	6.52	60.98
EES08419	Sorghum	cytosol, mitochondrion, plastid	15.78	60.8
TraesCS5B01G004800.1	Wheat	cytosol	58.8	60.7
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	13.95	60.45
Bra035079.1-P	Field mustard	cytosol	58.67	58.82
Bra003630.1-P	Field mustard	cytosol	56.84	56.84
Bra026038.1-P	Field mustard	cytosol	55.28	56.01
Bra039929.1-P	Field mustard	cytosol	46.41	48.97
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	47.72	48.16
Bra035809.1-P	Field mustard	cytosol	35.46	46.5
Bra035810.1-P	Field mustard	cytosol, mitochondrion	7.56	41.43

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	EnsemblPlantsGene:Bra013167	EnsemblPlants:Bra013167.1	EnsemblPlants:Bra013167.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	UniProt:M4D9K7	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002540980

Description

AT2G07050 (E=0.0) CAS1 | CAS1 (cycloartenol synthase 1); cycloartenol synthase

Coordinates

chrA03:-:20090538..20095585

Molecular Weight (calculated)

86774.6 Da

IEP (calculated)

6.375

GRAVY (calculated)

-0.272

Length

767 amino acids

Sequence
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEELAA VEEARKSFRE NRFAKKHSSD LLMRLQFSRE SLSRPVLPQV NIKDGDDVTE KMVETTLKRG
101: VDFYSTIQAS DGHWAGDYGG PMFLLPGLII TLSITGALNT VLSEQHKAEM RRYLHNHQAN KHYLPINEDG GWGLHIEGPS TMFGSVLNYV TLRLLGEGPN
201: DGDGAMEIGR DWILNHGGAT NITSWGKMWL SVLGAFEWSG NNPLPPEIWL LPYILPIHPG RMWCHCRMVY LPMSYLYGKR FVGPITSTVL SLRKELFTVP
301: YHEVDWNEAR NLCAKEDLYY PHPLVQDILW ASLHKIVEPV LTRWPGANLR EKALRTTLEH IHYEDENTRY ICIGPVNKVL NMLCCWVEDP NSEAFKLHLP
401: RIHDYLWVAE DGMKMQGYNG SQLWDTSFAV QAVLATNLVE EYGPVLKKAH SYVKNSQVSE DCPGDLSYWY RHISKGAWPF STADHGWPIS DCTAEGLKAA
501: LLLSKVPKEI VGEPVDTKRL YDAVNVIISL QNADGGFATY ELTRSYPWLE LINPAETFGD IVIDYPYVEC TSAAIQALVA FRKLYPGHRK KEVDECIEKA
601: VKFIESIQES DGSWYGSWAV CFTYGTWFGV KGLEAAGKTL KNSPTVAKAC EFLLSKQLPS GGWGESYLSC QDKVYSNLEG NRSHVVNTAW ALLSLIGAGQ
701: VEVDQKPLHR AARYLINAQM ESGDFPQQEI MGVFNRNCMI TYAAYRNIFP IWALGEYRSK VLLQQGE

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.