Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0065g00640.t01 Wine grape cytosol 82.69 82.37
AT2G07050.1 Thale cress cytosol 80.18 79.97
CDY50938 Canola cytosol 79.52 78.9
PGSC0003DMT400073861 Potato mitochondrion 51.12 78.5
Bra013167.1-P Field mustard cytosol 79.39 78.36
CDX93093 Canola cytosol 79.39 78.26
EES06259 Sorghum cytosol 75.83 75.83
CDX85104 Canola cytosol 75.83 75.13
CDX77512 Canola cytosol 76.88 74.9
Os02t0139700-01 Rice cytosol 74.77 74.57
TraesCS6B01G139000.1 Wheat golgi 74.77 74.47
TraesCS6A01G110800.1 Wheat cytosol, golgi 74.77 74.47
Zm00001d053889_P004 Maize cytosol 73.58 73.29
EES06258 Sorghum cytosol 73.58 73.19
Zm00001d015234_P002 Maize cytosol 73.18 72.7
TraesCS2B01G407300.1 Wheat cytosol 42.14 72.34
Solyc04g050670.1.1 Tomato cytosol 15.32 71.6
TraesCS6D01G099400.2 Wheat cytosol 74.64 70.98
Os02t0139500-02 Rice cytosol 33.03 70.62
TraesCS6B01G138500.1 Wheat cytosol 66.71 70.14
TraesCS2D01G387000.1 Wheat cytosol, plastid 71.6 70.03
HORVU6Hr1G019840.10 Barley mitochondrion 73.05 69.91
TraesCS6A01G110200.1 Wheat mitochondrion 69.09 69.36
TraesCS6D01G098800.1 Wheat mitochondrion 69.88 69.15
TraesCS2B01G407200.1 Wheat cytosol 6.74 68.0
KXG29303 Sorghum cytosol 7.27 67.07
Bra014952.1-P Field mustard cytosol 73.71 66.11
TraesCS5D01G011800.1 Wheat mitochondrion 65.26 65.09
TraesCS5A01G004900.1 Wheat mitochondrion 64.99 64.82
TraesCS5D01G006600.1 Wheat cytosol 64.99 64.74
TraesCS6A01G110300.1 Wheat cytosol, mitochondrion, peroxisome, plastid 64.47 64.47
KRH74136 Soybean cytosol 64.73 63.89
TraesCS5A01G005900.1 Wheat cytosol, golgi, mitochondrion, plastid 53.37 63.42
TraesCS5D01G006700.1 Wheat cytosol 63.67 63.42
KRH13217 Soybean cytosol 52.05 63.14
TraesCS6D01G098600.1 Wheat cytosol 70.81 63.13
Zm00001d008674_P001 Maize mitochondrion 42.93 62.74
EES08419 Sorghum cytosol, mitochondrion, plastid 16.25 61.81
GSMUA_Achr7P15800_001 Banana cytosol, mitochondrion 14.4 61.58
Zm00001d008671_P001 Maize cytosol 42.67 60.94
TraesCS5B01G004800.1 Wheat cytosol 59.71 60.83
KRG92127 Soybean cytosol 61.03 60.31
KRH41389 Soybean cytosol 60.5 60.03
KRH44692 Soybean endoplasmic reticulum 59.58 59.19
KRH46975 Soybean endoplasmic reticulum 59.45 59.06
KRH66676 Soybean cytosol 48.74 58.57
KRH10719 Soybean cytosol 35.14 58.33
KRH66671 Soybean cytosol 58.12 57.74
KRH11342 Soybean cytosol 50.59 55.03
KRH66677 Soybean cytosol 8.45 47.06
KRH38081 Soybean cytosol 4.1 41.89
Protein Annotations
Gene3D:1.50.10.20EntrezGene:548054MapMan:9.1.4.3MapMan:9.1.5.3UniProt:A0A0R4J2H1EMBL:ACUP02000005
EnsemblPlantsGene:GLYMA_01G001300GO:GO:0003674GO:GO:0003824GO:GO:0016853GO:GO:0016866EnsemblPlants:KRH74134
ProteinID:KRH74134ProteinID:KRH74134.1PFAM:PF13243PFAM:PF13249ScanProsite:PS01074PANTHER:PTHR11764
PANTHER:PTHR11764:SF27InterPro:SQ_cyclase_CInterPro:SQ_cyclase_NSUPFAM:SSF48239InterPro:Squalene_cyclaseTIGRFAMs:TIGR01787
InterPro:Terpene_synthase_CSInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI00003DFD6F:::
Description
hypothetical protein
Coordinates
chr1:-:227436..237628
Molecular Weight (calculated)
86409.5 Da
IEP (calculated)
6.786
GRAVY (calculated)
-0.287
Length
757 amino acids
Sequence
(BLAST)
001: MWKLKFAEGG NPWLRTLNNH VGRQVWEFDP KLGSPQDLLE IEKARQNFHD NRFTHKHSAD LLMRMQFARE NPTREVLPKV GVKDIEDVTQ EIVTKTLRRA
101: VSFHSTLQCH DGHWPGDYGG PMFLMPGLVI TLSITGALNT VLTEEHRKEI CRYLYNHQNK DGGWGLHIEG PSTMFGSVLS YITLRLLGEG PNDGQGEMEK
201: ARDWILGHGG ATYITSWGKM WLSVLGVYEW SGNNPLPPEI WLLPYMLPFH PGRMWCHCRM VYLPMSYLYG KRFVGPISPT VLSLRKELYT VPYHDIDWDQ
301: ARNLCAKEDL YYPHPLVQDI LWASLHKFLE PILMHWPGKR LREKAIISAL EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIYDYLWI
401: AEDGMKMQGY NGSQLWDTAF AVQAIIASNL IEEFGPTIRK AHTYIKNSQV LEDCPGDLNK WYRHISKGAW PFSTGDHGWP ISDCTAEGLK AVLLLSKIAP
501: EIVGEPIDVK RLYDSVNVIL SLQNEDGGFA TYELKRSYNW LEIINPAETF GDIVIDYPYV ECTSAAIQAL ASFRKLYPGH RREEIQHCID KATTFIEKIQ
601: ASDGSWYGSW GVCFTYGAWF GVKGLIAAGR SFSNCSSIRK ACEFLLSKQL PSGGWGESYL SCQNKVYSNL EGNRSHVVNT GWAMLALIDA GQAKRDSQPL
701: HRAAAYLINS QLEDGDFPQQ EIMGVFNKNC MITYAAYRNI FPIWALGEYQ SQVLQSR
Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.