CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 1
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46975	Soybean	endoplasmic reticulum	89.11	89.11
KRH44692	Soybean	endoplasmic reticulum	88.58	88.58
KRH66677	Soybean	cytosol	15.62	87.5
KRH66676	Soybean	cytosol	68.64	83.02
KRH10719	Soybean	cytosol	46.33	77.41
PGSC0003DMT400048796	Potato	cytosol	76.25	76.35
Solyc12g006530.1.1	Tomato	cytosol	75.72	75.82
KRH11342	Soybean	cytosol	68.64	75.14
PGSC0003DMT400043981	Potato	cytosol	59.71	74.59
Solyc12g006520.1.1	Tomato	cytosol	68.24	74.5
CDY40048	Canola	cytosol	7.87	74.07
PGSC0003DMT400051584	Potato	cytosol	73.49	73.59
PGSC0003DMT400048795	Potato	cytosol	70.6	73.4
Solyc12g006510.1.1	Tomato	cytosol	70.6	71.35
KRH38081	Soybean	cytosol	6.56	67.57
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	8.92	62.39
KRG92127	Soybean	cytosol	60.89	60.57
KRH41389	Soybean	cytosol	59.71	59.63
CDY49432	Canola	cytosol	55.64	58.32
CDY52589	Canola	cytosol	55.51	58.18
KRH74134	Soybean	endoplasmic reticulum	57.74	58.12
Bra039929.1-P	Field mustard	cytosol	55.25	57.91
AT1G78500.2	Thale cress	cytosol	57.87	57.5
AT5G36150.1	Thale cress	cytosol	56.69	56.84
CDY38925	Canola	cytosol, nucleus, plasma membrane	54.59	56.52
Solyc12g035440.1.1	Tomato	cytosol	6.43	56.32
Bra032185.1-P	Field mustard	cytosol, plasma membrane, plastid	56.17	56.32
AT5G48010.2	Thale cress	cytosol	56.43	56.14
AT4G15340.1	Thale cress	mitochondrion	56.17	55.87
AT4G15370.1	Thale cress	cytosol	55.38	55.6
CDY25392	Canola	cytosol	54.99	55.06
CDY29797	Canola	cytosol	54.99	55.06
Bra035809.1-P	Field mustard	cytosol	42.26	55.04
CDY25386	Canola	cytosol, plasma membrane, plastid	42.13	54.78
KRH74136	Soybean	cytosol	54.72	54.37
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	35.7	53.86
AT5G42600.1	Thale cress	cytosol	53.67	53.75
TraesCS4A01G495100.1	Wheat	cytosol	52.49	52.84
TraesCS7D01G004000.1	Wheat	cytosol	52.23	52.44
AT3G29255.1	Thale cress	cytosol	48.56	52.41
Bra035810.1-P	Field mustard	cytosol, mitochondrion	9.58	52.14
KRH13217	Soybean	cytosol	42.52	51.92
TraesCS7A01G003500.1	Wheat	cytosol	51.71	51.91
EES13537	Sorghum	cytosol	50.92	50.92
CDY08878	Canola	cytosol	12.2	50.27
Os08t0223900-00	Rice	cytosol	51.31	49.81
HORVU7Hr1G000400.1	Barley	cytosol, plastid	48.16	49.8
CDX89541	Canola	cytosol	9.45	48.98
Zm00001d024337_P001	Maize	cytosol	46.46	48.96
CDY63677	Canola	cytosol	4.72	37.89

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100809670	MapMan:9.1.4.3	EMBL:ACUP02002003	EnsemblPlantsGene:GLYMA_03G121300	GO:GO:0003674
GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	UniProt:K7KEK6	ProteinID:KRH66670.1	EnsemblPlants:KRH66671
ProteinID:KRH66671	ProteinID:KRH66671.1	ProteinID:KRH66672.1	PFAM:PF13243	PFAM:PF13249	PANTHER:PTHR11764
PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002339BD9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:33330721..33355066

Molecular Weight (calculated)

87654.1 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.299

Length

762 amino acids

Sequence
(BLAST)

001: MWRLKIADGG KDPYIFSTNN FVGRQTWEFD PEAGTPEERA QVEAARQNFY NNRFKVKACG DLLWRFQILR EKNFKQSIPS VKIEDGEEIT YEKVISTLRR
101: AAHHLSALQT SDGHWPAQIA GPLFFLPPLV FCMYITGHLD LVFPEEYRKE ILRYIYYHQN EDGGWGLHIE GHSTMFGTTL NYICMRILGE GPNGGHENAC
201: ARGKKWIHDH GGVTHIPSWG KTWLSILGVF DWCGSNPMPP EFWIIPSFLP MHPAKMWCYC RLVYMPMSYL YGKRFVGPIT PLILQLREEL FTQPYEKVNW
301: KKVRHQCAKE DLYYPHSLIQ DLVWDSLYMF TEPLLTCWPF NKLIREKALQ VTMNHIHYED ENSRYITIGC VEKVLCMLAC WVEDPQGDAF KKHLARVSDY
401: LWVSEDGMTM QSFGSQEWDA GFAVQALLAT KLIDEIGHSL AKGHDFIKKS QVRDNPSGDF KSMYRHITKG SWTFSDQDHG WQVSDCTAEG LKCCLLLSKL
501: SPEIVGEKVK PERFYDSVNI LLSLQSKKGG IAAWEPIGAQ EWLELLNPTE FFEDIVIEHE YVECTGSAIQ ALVLFQKLYP EHRKTEIKNF IVNAVQFLED
601: TQTTNGSWYG CWGVCYTYGS WFALGGLAAA GKTYTNCNAI RKAVKFLLTT QREDGGWGES YLSSPKKIYI PLEGSRSNVV QTAWALMGLI YAGQSERDLT
701: PLHQAAKLLI NSQLEEGDWP QQEITGVFLK NCMMHYPMYR NIFPMWALAE YRRRVPLPST EG

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.