Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G15370.1 | Thale cress | cytosol | 73.72 | 73.91 |
| AT1G78500.2 | Thale cress | cytosol | 73.85 | 73.27 |
| AT4G15340.1 | Thale cress | mitochondrion | 72.54 | 72.06 |
| AT5G36150.1 | Thale cress | cytosol | 71.62 | 71.71 |
| AT5G48010.2 | Thale cress | cytosol | 70.56 | 70.1 |
| AT3G29255.1 | Thale cress | cytosol | 64.52 | 69.55 |
| VIT_09s0054g01210.t01 | Wine grape | cytosol | 56.5 | 56.8 |
| AT1G78960.2 | Thale cress | cytosol | 55.98 | 55.83 |
| AT1G78970.1 | Thale cress | cytosol | 55.45 | 55.75 |
| AT1G78955.1 | Thale cress | cytosol | 56.24 | 55.66 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 55.98 | 55.47 |
| KRH46975 | Soybean | endoplasmic reticulum | 55.45 | 55.38 |
| KRH66676 | Soybean | cytosol | 45.2 | 54.6 |
| KRH44692 | Soybean | endoplasmic reticulum | 54.66 | 54.59 |
| KRH66671 | Soybean | cytosol | 53.75 | 53.67 |
| AT1G66960.2 | Thale cress | mitochondrion | 53.75 | 52.98 |
| KRH10719 | Soybean | cytosol | 31.41 | 52.41 |
| KRH11342 | Soybean | cytosol | 47.57 | 52.01 |
| KRH66677 | Soybean | cytosol | 9.2 | 51.47 |
| AT2G07050.1 | Thale cress | cytosol | 46.52 | 46.64 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 44.55 | 44.78 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 44.02 | 44.14 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 43.89 | 44.01 |
| AT3G45130.2 | Thale cress | cytosol | 43.63 | 43.46 |
| EES13537 | Sorghum | cytosol | 43.36 | 43.31 |
| Zm00001d024337_P001 | Maize | cytosol | 41.13 | 43.29 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 41.52 | 42.88 |
| Os08t0223900-00 | Rice | cytosol | 43.5 | 42.17 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 8.94 | 33.66 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:834267 | MapMan:9.1.4.3 | ProteinID:AED94834.1 | ArrayExpress:AT5G42600 | EnsemblPlantsGene:AT5G42600 |
| RefSeq:AT5G42600 | TAIR:AT5G42600 | RefSeq:AT5G42600-TAIR-G | EnsemblPlants:AT5G42600.1 | TAIR:AT5G42600.1 | Unigene:At.66706 |
| ProteinID:BAB10498.1 | EMBL:BT020312 | EMBL:BT020456 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016104 | GO:GO:0016853 | GO:GO:0016866 |
| GO:GO:0034074 | Symbol:MRN1 | RefSeq:NP_199074.1 | PFAM:PF13243 | PFAM:PF13249 | PO:PO:0007131 |
| PO:PO:0009005 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | UniProt:Q9FJV8 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI00000A2B9A | SEG:seg | : | : | : | : |
Description
MRN1Marneral synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV8]
Coordinates
chr5:+:17053453..17058245
Molecular Weight (calculated)
87211.9 Da
IEP (calculated)
6.757
GRAVY (calculated)
-0.285
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLRIGAEA RQDPHLFTTN NFAGRQIWEF DANGGSPEEL AEVEEARLNF ANNKSRFKAS PDLFWRRQFL REKKFEQKIP RVRIEDAEKI TYEDAKTALR
101: RGVLYYAACQ ANDGHWPSEV SGSMFLDAPF VICLYITGHL EKIFTLEHVK ELLRYMYNTQ NEDGGWGLDV ESHSVMFCTV LNYICLRILG VEPDHDGQKS
201: ACARARKWIL DHGGATYAPM VAKAWLSVLG VYDWSGCKPL PPEIWMLPSF SPINGGTLWI YIRDLLMGMS YLYGKKFVAT PTALILQLRE ELYPQPYSKI
301: IWSKARNRCA KEDLLYPKSF GQDLFWEGVH MLSENIINRW PLNKFVRQRA LRTTMELVHY HDETTHYITG ACVAKPFHML ACWVEDPDGD YFKKHLARVP
401: DFIWIAEDGL KFQLMGMQSW NAALSLQVML AANMDDEIRS TLIKGYDFLK QSQISENPQG DHLKMFRDIT KGGWTFQDRE QGLPISDGTA ESIECCIHFH
501: RMPSEFIGEK MDVEKLYDAV NFLIYLQSDN GGMPVWEPAP GKKWLEWLSP VEHVENTVVE QEYLECTGSV IAGLVCFKKE FPDHRPKEIE KLIKKGLKYI
601: EDLQMPDGSW YGNWGVCFTY GTLFAVRGLA AAGKTFGNSE AIRRAVQFIL NTQNAEGGWG ESALSCPNKK YIPSKGNVTN VVNTGQAMMV LLIGGQMERD
701: PSPVHRAAKV LINSQLDIGD FPQQERRGIY MNMLLHYPTY RNMFSLWALA LYTNALRLLV S
101: RGVLYYAACQ ANDGHWPSEV SGSMFLDAPF VICLYITGHL EKIFTLEHVK ELLRYMYNTQ NEDGGWGLDV ESHSVMFCTV LNYICLRILG VEPDHDGQKS
201: ACARARKWIL DHGGATYAPM VAKAWLSVLG VYDWSGCKPL PPEIWMLPSF SPINGGTLWI YIRDLLMGMS YLYGKKFVAT PTALILQLRE ELYPQPYSKI
301: IWSKARNRCA KEDLLYPKSF GQDLFWEGVH MLSENIINRW PLNKFVRQRA LRTTMELVHY HDETTHYITG ACVAKPFHML ACWVEDPDGD YFKKHLARVP
401: DFIWIAEDGL KFQLMGMQSW NAALSLQVML AANMDDEIRS TLIKGYDFLK QSQISENPQG DHLKMFRDIT KGGWTFQDRE QGLPISDGTA ESIECCIHFH
501: RMPSEFIGEK MDVEKLYDAV NFLIYLQSDN GGMPVWEPAP GKKWLEWLSP VEHVENTVVE QEYLECTGSV IAGLVCFKKE FPDHRPKEIE KLIKKGLKYI
601: EDLQMPDGSW YGNWGVCFTY GTLFAVRGLA AAGKTFGNSE AIRRAVQFIL NTQNAEGGWG ESALSCPNKK YIPSKGNVTN VVNTGQAMMV LLIGGQMERD
701: PSPVHRAAKV LINSQLDIGD FPQQERRGIY MNMLLHYPTY RNMFSLWALA LYTNALRLLV S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.