Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G78960.2 | Thale cress | cytosol | 79.79 | 79.16 |
| AT1G66960.2 | Thale cress | mitochondrion | 74.24 | 72.8 |
| AT1G78955.1 | Thale cress | cytosol | 71.99 | 70.87 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 71.86 | 70.83 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 13.34 | 58.72 |
| AT1G78500.2 | Thale cress | cytosol | 57.33 | 56.58 |
| AT5G48010.2 | Thale cress | cytosol | 57.2 | 56.53 |
| AT2G07050.1 | Thale cress | cytosol | 56.01 | 55.86 |
| AT4G15370.1 | Thale cress | cytosol | 55.88 | 55.73 |
| AT4G15340.1 | Thale cress | mitochondrion | 56.27 | 55.61 |
| Solyc12g035460.1.1 | Tomato | cytosol | 16.51 | 55.56 |
| AT5G42600.1 | Thale cress | cytosol | 55.75 | 55.45 |
| AT5G36150.1 | Thale cress | cytosol | 54.69 | 54.47 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 52.71 | 52.71 |
| AT3G45130.2 | Thale cress | cytosol | 52.84 | 52.36 |
| AT3G29255.1 | Thale cress | cytosol | 48.74 | 52.27 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 52.31 | 52.17 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 52.05 | 51.91 |
| EES13537 | Sorghum | cytosol | 51.65 | 51.31 |
| Os08t0223900-00 | Rice | cytosol | 52.44 | 50.57 |
| Zm00001d024337_P001 | Maize | cytosol | 47.29 | 49.52 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 48.08 | 49.39 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 9.78 | 36.63 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:844237 | MapMan:9.1.4.3 | ProteinID:AAC17055.1 | ProteinID:AEE36186.1 | ProteinID:AEE36187.1 |
| EMBL:AF360147 | ProteinID:ANM58606.1 | ArrayExpress:AT1G78970 | EnsemblPlantsGene:AT1G78970 | RefSeq:AT1G78970 | TAIR:AT1G78970 |
| RefSeq:AT1G78970-TAIR-G | EnsemblPlants:AT1G78970.1 | TAIR:AT1G78970.1 | EMBL:AY052358 | EMBL:AY142678 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016829 | GO:GO:0016853 | GO:GO:0016866 | GO:GO:0042299 | GO:GO:0042300 |
| GO:GO:0102245 | Symbol:LUP1 | RefSeq:NP_001321029.1 | RefSeq:NP_178018.1 | RefSeq:NP_849903.1 | PFAM:PF13243 |
| PFAM:PF13249 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 |
| UniProt:Q9C5M3 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 |
| InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | EMBL:U49919 | EMBL:U87266 | UniParc:UPI00000AC3CE | SEG:seg |
Description
LUP1Lupeol synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M3]
Coordinates
chr1:+:29703055..29708175
Molecular Weight (calculated)
87356.8 Da
IEP (calculated)
6.435
GRAVY (calculated)
-0.315
Length
757 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIGKGN GEDPHLFSSN NFVGRQTWKF DHKAGSPEER AAVEEARRGF LDNRFRVKGC SDLLWRMQFL REKKFEQGIP QLKATNIEEI TYETTTNALR
101: RGVRYFTALQ ASDGHWPGEI TGPLFFLPPL IFCLYITGHL EEVFDAEHRK EMLRHIYCHQ NEDGGWGLHI ESKSVMFCTV LNYICLRMLG ENPEQDACKR
201: ARQWILDRGG VIFIPSWGKF WLSILGVYDW SGTNPTPPEL LMLPSFLPIH PGKILCYSRM VSIPMSYLYG KRFVGPITPL ILLLREELYL EPYEEINWKK
301: SRRLYAKEDM YYAHPLVQDL LSDTLQNFVE PLLTRWPLNK LVREKALQLT MKHIHYEDEN SHYITIGCVE KVLCMLACWV ENPNGDYFKK HLARIPDYMW
401: VAEDGMKMQS FGCQLWDTGF AIQALLASNL PDETDDALKR GHNYIKASQV RENPSGDFRS MYRHISKGAW TFSDRDHGWQ VSDCTAEALK CCLLLSMMSA
501: DIVGQKIDDE QLYDSVNLLL SLQSGNGGVN AWEPSRAYKW LELLNPTEFM ANTMVEREFV ECTSSVIQAL DLFRKLYPDH RKKEINRSIE KAVQFIQDNQ
601: TPDGSWYGNW GVCFIYATWF ALGGLAAAGE TYNDCLAMRN GVHFLLTTQR DDGGWGESYL SCSEQRYIPS EGERSNLVQT SWAMMALIHT GQAERDLIPL
701: HRAAKLIINS QLENGDFPQQ EIVGAFMNTC MLHYATYRNT FPLWALAEYR KVVFIVN
101: RGVRYFTALQ ASDGHWPGEI TGPLFFLPPL IFCLYITGHL EEVFDAEHRK EMLRHIYCHQ NEDGGWGLHI ESKSVMFCTV LNYICLRMLG ENPEQDACKR
201: ARQWILDRGG VIFIPSWGKF WLSILGVYDW SGTNPTPPEL LMLPSFLPIH PGKILCYSRM VSIPMSYLYG KRFVGPITPL ILLLREELYL EPYEEINWKK
301: SRRLYAKEDM YYAHPLVQDL LSDTLQNFVE PLLTRWPLNK LVREKALQLT MKHIHYEDEN SHYITIGCVE KVLCMLACWV ENPNGDYFKK HLARIPDYMW
401: VAEDGMKMQS FGCQLWDTGF AIQALLASNL PDETDDALKR GHNYIKASQV RENPSGDFRS MYRHISKGAW TFSDRDHGWQ VSDCTAEALK CCLLLSMMSA
501: DIVGQKIDDE QLYDSVNLLL SLQSGNGGVN AWEPSRAYKW LELLNPTEFM ANTMVEREFV ECTSSVIQAL DLFRKLYPDH RKKEINRSIE KAVQFIQDNQ
601: TPDGSWYGNW GVCFIYATWF ALGGLAAAGE TYNDCLAMRN GVHFLLTTQR DDGGWGESYL SCSEQRYIPS EGERSNLVQT SWAMMALIHT GQAERDLIPL
701: HRAAKLIINS QLENGDFPQQ EIVGAFMNTC MLHYATYRNT FPLWALAEYR KVVFIVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.