Factsheet for Solyc12g035460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72111	Canola	cytosol	51.56	28.16
Solyc12g006510.1.1	Tomato	cytosol	70.22	20.95
Solyc12g006520.1.1	Tomato	cytosol	64.0	20.63
Solyc12g006530.1.1	Tomato	cytosol	68.44	20.24
CDX79277	Canola	cytosol	56.44	18.49
Bra003630.1-P	Field mustard	cytosol	59.56	17.47
CDY57947	Canola	cytosol	59.11	17.34
CDX87419	Canola	cytosol	57.78	16.99
Bra035079.1-P	Field mustard	cytosol	57.33	16.86
Bra026038.1-P	Field mustard	cytosol	56.44	16.78
AT1G78950.2	Thale cress	cytosol, plasma membrane, plastid	56.89	16.67
AT1G78955.1	Thale cress	cytosol	56.44	16.52
AT1G78970.1	Thale cress	cytosol	55.56	16.51
CDX87420	Canola	cytosol	56.0	16.41
AT1G78960.2	Thale cress	cytosol	55.56	16.38
CDY35103	Canola	mitochondrion	56.44	16.12
CDX88494	Canola	endoplasmic reticulum, plasma membrane	55.56	16.11
CDX88493	Canola	cytosol	55.56	16.07
Solyc07g042630.2.1	Tomato	cytosol	52.89	15.74
AT1G66960.2	Thale cress	mitochondrion	53.33	15.54
Zm00001d024337_P001	Maize	cytosol	44.89	13.97
Solyc04g070980.2.1	Tomato	plastid	46.67	13.82
TraesCS4A01G495100.1	Wheat	cytosol	44.89	13.34
EES13537	Sorghum	cytosol	44.89	13.25
TraesCS7A01G003500.1	Wheat	cytosol	44.44	13.18
TraesCS7D01G004000.1	Wheat	cytosol	44.44	13.18
HORVU7Hr1G000400.1	Barley	cytosol, plastid	42.67	13.03
Os08t0223900-00	Rice	cytosol	44.89	12.87
Solyc05g047580.2.1	Tomato	cytosol	39.56	12.18
Solyc04g050670.1.1	Tomato	cytosol	7.56	10.49
CDY20916	Canola	cytosol	4.0	3.56
Solyc12g035440.1.1	Tomato	cytosol	0.89	2.3
Solyc12g035450.1.1	Tomato	cytosol, plasma membrane, plastid	0.44	0.58

Protein Annotations

EnsemblPlants:Solyc12g035460.1.1	EnsemblPlantsGene:Solyc12g035460.1	Gene3D:1.50.10.20	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16
SUPFAM:SSF48239	UniParc:UPI0002769E76	UniProt:K4DE07	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr12:-:58332429..58334482

Molecular Weight (calculated)

25615.7 Da

IEP (calculated)

7.656

GRAVY (calculated)

-0.095

Length

225 amino acids

Sequence
(BLAST)

001: MCVCEFDVKD NPSGDFKGMY RHISKGSWTF SDQDHGCCCL LFSTMPSELI SKAIKPARLY DSVMLFFPYR SLFTCQSRYV ECTGSSIQTL VLFKKLYPGH
101: RITEIDNFIH NAVKYFEYVQ KLDNSWYGCC GVCFTYASWF ALGGIVVAGK VYREVETDHS NLVQTAWALI GLIHSRQVNR DPRPLHHAAR LLINSQLEFG
201: DFAQQVGLSA NYKLNKGDWN GVDCI

Best Arabidopsis Sequence Match ( AT1G78955.2 )
(BLAST)

001: MIQFLKEKKF EQVIPPAKVE DANNITSEIA TNALRKGVNF LSALQASDGH WPAENAGPLF FLPPLVFCLY VTGHLHEIFT QDHRREVLRY IYCHQNEDGG
101: WGLHIEGNST MFCTTLNYIC MRILGEGPNG GPGNACKRAR DWILDHGGAT YIPSWGKTWL SILGVFDWSG SNPMPPEFWI LPSFLPIHPA KMWCYCRLVY
201: MPMSYLYGKR FVGPISPLIL QLREEIYLQP YAKINWNRAR HLCAKEDAYC PHPQIQDVIW NCLYIFTEPF LACWPFNKLL REKALGVAMK HIHYEDENSR
301: YITIGCVEKA LCMLACWVED PNGIHFKKHL LRISDYLWIA EDGMKMQSFG SQLWDSGFAL QALVASNLVN EIPDVLRRGY DFLKNSQVRE NPSGDFTNMY
401: RHISKGSWTF SDRDHGWQAS DCTAESFKCC LLLSMIPPDI VGPKMDPEQL YEAVTILLSL QSKNGGVTAW EPARGQEWLE LLNPTEVFAD IVVEHEYNEC
501: TSSAIQALIL FKQLYPNHRT EEINTSIKKA VQYIESIQML DGSWYGSWGV CFTYSTWFGL GGLAAAGKTY NNCLAMRKGV HFLLTTQKDN GGWGESYLSC
601: PKKRYIPSEG ERSNLVQTSW AMMGLLHAGQ AERDPSPLHR AAKLLINSQL ENGDFPQQVL LET

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.