Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g01370.t01 | Wine grape | cytosol | 32.18 | 20.9 |
| KRH66677 | Soybean | cytosol | 26.44 | 16.91 |
| VIT_09s0054g01480.t01 | Wine grape | cytosol | 58.62 | 12.14 |
| CDY40048 | Canola | cytosol | 9.2 | 9.88 |
| Solyc12g006510.1.1 | Tomato | cytosol | 74.71 | 8.62 |
| Solyc12g006530.1.1 | Tomato | cytosol | 74.71 | 8.54 |
| Solyc12g006520.1.1 | Tomato | cytosol | 67.82 | 8.45 |
| VIT_09s0054g01220.t01 | Wine grape | cytosol | 64.37 | 7.4 |
| VIT_09s0054g01230.t01 | Wine grape | cytosol | 64.37 | 7.28 |
| VIT_09s0054g01390.t01 | Wine grape | cytosol | 63.22 | 7.17 |
| VIT_09s0054g01410.t01 | Wine grape | cytosol | 63.22 | 7.15 |
| KRH66671 | Soybean | cytosol | 56.32 | 6.43 |
| VIT_09s0054g01520.t01 | Wine grape | cytosol | 63.22 | 6.33 |
| KRH44692 | Soybean | endoplasmic reticulum | 54.02 | 6.17 |
| VIT_09s0054g01340.t01 | Wine grape | cytosol | 28.74 | 6.04 |
| KRH46975 | Soybean | endoplasmic reticulum | 51.72 | 5.91 |
| KRH11342 | Soybean | cytosol | 43.68 | 5.46 |
| Solyc05g047580.2.1 | Tomato | cytosol | 44.83 | 5.34 |
| Solyc07g042630.2.1 | Tomato | cytosol | 44.83 | 5.16 |
| Solyc04g070980.2.1 | Tomato | plastid | 42.53 | 4.87 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 40.23 | 4.62 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 39.08 | 4.48 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 37.93 | 4.35 |
| EES13537 | Sorghum | cytosol | 35.63 | 4.07 |
| Zm00001d024337_P001 | Maize | cytosol | 33.33 | 4.01 |
| Os08t0223900-00 | Rice | cytosol | 35.63 | 3.95 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 33.33 | 3.93 |
| KRH66676 | Soybean | cytosol | 22.99 | 3.17 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 4.6 | 2.33 |
| Solyc12g035460.1.1 | Tomato | cytosol | 2.3 | 0.89 |
| VIT_09s0054g01280.t01 | Wine grape | cytosol | 3.45 | 0.85 |
| KRH10719 | Soybean | cytosol | 3.45 | 0.66 |
| Solyc04g050670.1.1 | Tomato | cytosol | 1.15 | 0.62 |
| VIT_09s0054g01360.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 3.45 | 0.59 |
| VIT_09s0054g01470.t01 | Wine grape | cytosol | 2.3 | 0.51 |
Protein Annotations
| EnsemblPlants:Solyc12g035440.1.1 | EnsemblPlantsGene:Solyc12g035440.1 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | SUPFAM:SSF81853 | UniParc:UPI0002769E74 |
| UniProt:K4DE05 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:58343091..58343459
Molecular Weight (calculated)
10017.1 Da
IEP (calculated)
6.083
GRAVY (calculated)
-0.279
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: MGEKNSKQRI EAVKLEYGEE ISEEIATNAL RTSVNFFSAL KATDGHWPAE MPVMCLYISG HLNTVLPAEH RKEILRYIYC HQVYDVM
001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.