Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20916 | Canola | cytosol | 39.51 | 12.65 |
| CDX79277 | Canola | cytosol | 85.19 | 10.04 |
| PGSC0003DMT400043981 | Potato | cytosol | 75.31 | 10.0 |
| KRH66676 | Soybean | cytosol | 76.54 | 9.84 |
| CDY35103 | Canola | mitochondrion | 95.06 | 9.77 |
| Solyc12g035440.1.1 | Tomato | cytosol | 9.88 | 9.2 |
| CDX88494 | Canola | endoplasmic reticulum, plasma membrane | 86.42 | 9.02 |
| CDX87419 | Canola | cytosol | 85.19 | 9.02 |
| CDY57947 | Canola | cytosol | 83.95 | 8.87 |
| KRH44692 | Soybean | endoplasmic reticulum | 80.25 | 8.53 |
| CDX87420 | Canola | cytosol | 80.25 | 8.46 |
| PGSC0003DMT400048795 | Potato | cytosol | 76.54 | 8.46 |
| CDX88493 | Canola | cytosol | 80.25 | 8.35 |
| KRH11342 | Soybean | cytosol | 71.6 | 8.33 |
| PGSC0003DMT400048796 | Potato | cytosol | 77.78 | 8.28 |
| KRH46975 | Soybean | endoplasmic reticulum | 77.78 | 8.27 |
| PGSC0003DMT400051584 | Potato | cytosol | 76.54 | 8.15 |
| KRH66671 | Soybean | cytosol | 74.07 | 7.87 |
| CDY38925 | Canola | cytosol, nucleus, plasma membrane | 64.2 | 7.07 |
| Zm00001d024337_P001 | Maize | cytosol | 59.26 | 6.64 |
| CDX77512 | Canola | cytosol | 62.96 | 6.56 |
| CDY50938 | Canola | cytosol | 61.73 | 6.55 |
| CDX93093 | Canola | cytosol | 61.73 | 6.51 |
| CDY49432 | Canola | cytosol | 55.56 | 6.19 |
| CDY52589 | Canola | cytosol | 55.56 | 6.19 |
| CDY29797 | Canola | cytosol | 58.02 | 6.18 |
| CDY25392 | Canola | cytosol | 56.79 | 6.04 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 54.32 | 5.97 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 55.56 | 5.94 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 55.56 | 5.93 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 55.56 | 5.93 |
| EES13537 | Sorghum | cytosol | 55.56 | 5.91 |
| CDX85104 | Canola | cytosol | 55.56 | 5.89 |
| Os08t0223900-00 | Rice | cytosol | 55.56 | 5.73 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 39.51 | 5.46 |
| CDX89540 | Canola | endoplasmic reticulum, golgi, plastid | 22.22 | 3.56 |
| CDX89541 | Canola | cytosol | 4.94 | 2.72 |
| CDY20917 | Canola | cytosol | 8.64 | 1.71 |
| CDY08878 | Canola | cytosol | 2.47 | 1.08 |
| KRH10719 | Soybean | cytosol | 4.94 | 0.88 |
| CDY34478 | Canola | cytosol, extracellular | 3.7 | 0.8 |
| CDY72111 | Canola | cytosol | 3.7 | 0.73 |
| KRH66677 | Soybean | cytosol | 0.0 | 0.0 |
| VIT_09s0054g01280.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDX85103 | Canola | cytosol | 0.0 | 0.0 |
| CDY29789 | Canola | cytosol | 0.0 | 0.0 |
| CDY63677 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY40048 | EnsemblPlantsGene:GSBRNA2T00068952001 | Gene3D:1.50.10.20 | InterPro:SQ_cyclase_N | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF16 | PFAM:PF13249 | ProteinID:CDY40048 | ProteinID:CDY40048.1 | SUPFAM:SSF48239 | UniParc:UPI0004EF3050 |
| UniProt:A0A078HTJ6 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g12670DBnaC05g12670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTJ6]
Coordinates
chrLK032462:-:239715..240047
Molecular Weight (calculated)
9195.0 Da
IEP (calculated)
8.645
GRAVY (calculated)
-0.362
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MLRYIYCHQN EDGGWGLHIE GKSGMFCTAL NYICLRILGE GPDGGPRNAC KRARQWILDR GGVTYIPSWG KSWLSVRFSE T
001: MLRHIYCHQN EDGGWGLHIE GKSVMFCTVL NYICLRMLGE GPNGGRNNAC KRARQWILDH GGVTYIPSWG KIWLSILGIY DWSGTNPMPP EIWLLPSFFP
101: IHLGKTLCYT RMVYMPMSYL YGKRFVGPLT PLIMLLRKEL HLQPYEEINW NKARRLCAKE DMIYPHPLVQ DLLWDTLHNF VEPILTNWPL KKLVREKALR
201: VAMEHIHYED ENSHYITIGC VEKVLCMLAC WIENPNGDHF KKHLARIPDF MWVAEDGLKM QSFGSQLWDT VFAIQALLAC DLSDETDDVL RKGHSFIKKS
301: QVRENPSGDF KSMYRHISKG AWTLSDRDHG WQVSDCTAEA LKCCMLLSMM PAEVVGQKID PEQLYDSVNL LLSLQGEKGG LTAWEPVRAQ EWLELLNPTD
401: FFTCVMAERE YVECTSAVIQ ALVLFKQLYP DHRTKEIIKS IEKGVQFIES KQTPDGSWHG NWGICFIYAT WFALSGLAAA GKTYKSCLAV RKGVDFLLAI
501: QEEDGGWGES HLSCPEQRYI PLEGNRSNLV QTAWAMMGLI HAGQAERDPT PLHRAAKLII TSQLENGDFP QQEILGVFMN TCMLHYATYR NIFPLWALAE
601: YRKAAFATHQ DL
101: IHLGKTLCYT RMVYMPMSYL YGKRFVGPLT PLIMLLRKEL HLQPYEEINW NKARRLCAKE DMIYPHPLVQ DLLWDTLHNF VEPILTNWPL KKLVREKALR
201: VAMEHIHYED ENSHYITIGC VEKVLCMLAC WIENPNGDHF KKHLARIPDF MWVAEDGLKM QSFGSQLWDT VFAIQALLAC DLSDETDDVL RKGHSFIKKS
301: QVRENPSGDF KSMYRHISKG AWTLSDRDHG WQVSDCTAEA LKCCMLLSMM PAEVVGQKID PEQLYDSVNL LLSLQGEKGG LTAWEPVRAQ EWLELLNPTD
401: FFTCVMAERE YVECTSAVIQ ALVLFKQLYP DHRTKEIIKS IEKGVQFIES KQTPDGSWHG NWGICFIYAT WFALSGLAAA GKTYKSCLAV RKGVDFLLAI
501: QEEDGGWGES HLSCPEQRYI PLEGNRSNLV QTAWAMMGLI HAGQAERDPT PLHRAAKLII TSQLENGDFP QQEILGVFMN TCMLHYATYR NIFPLWALAE
601: YRKAAFATHQ DL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.