Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87420 | Canola | cytosol | 95.5 | 96.74 |
| AT1G78955.1 | Thale cress | cytosol | 86.89 | 87.91 |
| CDY40048 | Canola | cytosol | 8.35 | 80.25 |
| CDX87419 | Canola | cytosol | 71.85 | 73.07 |
| CDY72111 | Canola | cytosol | 38.3 | 72.33 |
| CDY57947 | Canola | cytosol | 71.21 | 72.23 |
| CDX88494 | Canola | endoplasmic reticulum, plasma membrane | 71.34 | 71.52 |
| CDX79277 | Canola | cytosol | 62.47 | 70.74 |
| CDY35103 | Canola | mitochondrion | 69.67 | 68.78 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 13.75 | 62.21 |
| CDY20917 | Canola | cytosol | 31.88 | 60.49 |
| CDY20916 | Canola | cytosol | 19.67 | 60.47 |
| CDY49432 | Canola | cytosol | 55.53 | 59.42 |
| CDY52589 | Canola | cytosol | 55.4 | 59.28 |
| CDY38925 | Canola | cytosol, nucleus, plasma membrane | 54.37 | 57.47 |
| CDY50938 | Canola | cytosol | 55.14 | 56.23 |
| CDY25392 | Canola | cytosol | 54.76 | 55.98 |
| CDY29797 | Canola | cytosol | 54.63 | 55.85 |
| CDX85104 | Canola | cytosol | 54.76 | 55.76 |
| CDX93093 | Canola | cytosol | 55.01 | 55.73 |
| CDX77512 | Canola | cytosol | 55.53 | 55.6 |
| Solyc12g035460.1.1 | Tomato | cytosol | 16.07 | 55.56 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 41.39 | 54.95 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 52.96 | 54.43 |
| CDY29789 | Canola | cytosol | 6.81 | 54.08 |
| CDX89540 | Canola | endoplasmic reticulum, golgi, plastid | 35.09 | 54.06 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 52.19 | 53.49 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 52.06 | 53.36 |
| CDX89541 | Canola | cytosol | 10.03 | 53.06 |
| CDY08878 | Canola | cytosol | 12.6 | 52.97 |
| CDX85103 | Canola | cytosol | 7.2 | 52.83 |
| EES13537 | Sorghum | cytosol | 50.9 | 51.97 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 48.2 | 50.88 |
| Os08t0223900-00 | Rice | cytosol | 51.03 | 50.57 |
| Zm00001d024337_P001 | Maize | cytosol | 46.4 | 49.93 |
| CDY34478 | Canola | cytosol, extracellular | 20.95 | 43.7 |
| CDY63677 | Canola | cytosol | 4.88 | 40.0 |
Protein Annotations
| EnsemblPlants:CDX88493 | EnsemblPlantsGene:GSBRNA2T00148041001 | Gene3D:1.50.10.20 | GO:A0A078DMQ3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016866 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF16 | PFAM:PF13243 | PFAM:PF13249 | ProteinID:CDX88493 | ProteinID:CDX88493.1 | SEG:seg |
| SUPFAM:SSF48239 | TIGRFAMs:TIGR01787 | UniParc:UPI0004EE827E | MapMan:9.1.4.3 | : | : |
Description
BnaC06g39370D
Coordinates
chrLK031855:-:1271930..1277209
Molecular Weight (calculated)
89160.1 Da
IEP (calculated)
7.307
GRAVY (calculated)
-0.262
Length
778 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKIAKGS KEEPYLFSTN NFLGRQTWEF DPDAGTSEER AAVDEARRFF FDNRFRVKAS SDLIWRMQFL KEKKFKQAIP SVKVEDAKKL TSETASNALR
101: RGVSFLSSLQ ASDGHWPAEN AGPLFFLPPL VFCLFVTGHL HEIFTKEHRR EILRYIYCHQ NEDGGWGLHI EGHSTMFCTT LNYICLRILG EGPNEGPGNA
201: CKRAREWILG HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSCL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILKLREE IYLQPYAEIN
301: WNKARHLCAK EDAYYPRPLV QNVIWDCLYM FAEPFLTCWP LNKLLREKAL DVAMKHIHYE DENSRYITIG CVEKALCMLA CWVENPNGVH FKKHLLRVSD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALLA SNLCSEIPEV LRRGHDFFKD SQVRDNPSSD FNSMHRHISK GSWTFSDRDH GWQASDCTAE GLKCCLLLSM
501: MPPDIVGPKM DPEQLYESVI ILLSLQSKNG GVTAWEPARG QEWLELLNPT EFFADIVVEH EYNECTSSTI QALILFKQLY PDHRTEEINS SIKKAVQYIE
601: NIQMLDGSWY GSWGVCFTYS TWFALGGLAA AGKTYSNCLA MRKGVHFLLT IQKDNGGWGE SYLSCSKKRY IPSEGEKTNL VQTSWAMMGL LHAGQAERDP
701: TPLHRAAKLL INSQLENGDF PQQEITGAFM KTCLLHYAAY RNIFPVWALA EYSRLFLSTV RCKAKKEANL EPIHLFHP
101: RGVSFLSSLQ ASDGHWPAEN AGPLFFLPPL VFCLFVTGHL HEIFTKEHRR EILRYIYCHQ NEDGGWGLHI EGHSTMFCTT LNYICLRILG EGPNEGPGNA
201: CKRAREWILG HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSCL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILKLREE IYLQPYAEIN
301: WNKARHLCAK EDAYYPRPLV QNVIWDCLYM FAEPFLTCWP LNKLLREKAL DVAMKHIHYE DENSRYITIG CVEKALCMLA CWVENPNGVH FKKHLLRVSD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALLA SNLCSEIPEV LRRGHDFFKD SQVRDNPSSD FNSMHRHISK GSWTFSDRDH GWQASDCTAE GLKCCLLLSM
501: MPPDIVGPKM DPEQLYESVI ILLSLQSKNG GVTAWEPARG QEWLELLNPT EFFADIVVEH EYNECTSSTI QALILFKQLY PDHRTEEINS SIKKAVQYIE
601: NIQMLDGSWY GSWGVCFTYS TWFALGGLAA AGKTYSNCLA MRKGVHFLLT IQKDNGGWGE SYLSCSKKRY IPSEGEKTNL VQTSWAMMGL LHAGQAERDP
701: TPLHRAAKLL INSQLENGDF PQQEITGAFM KTCLLHYAAY RNIFPVWALA EYSRLFLSTV RCKAKKEANL EPIHLFHP
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
Arabidopsis Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.