Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40048 | Canola | cytosol | 12.65 | 39.51 |
| CDY29789 | Canola | cytosol | 11.86 | 30.61 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 15.41 | 22.67 |
| CDY57947 | Canola | cytosol | 66.8 | 22.03 |
| CDX87419 | Canola | cytosol | 65.61 | 21.7 |
| CDX79277 | Canola | cytosol | 58.89 | 21.69 |
| CDX88494 | Canola | endoplasmic reticulum, plasma membrane | 66.4 | 21.65 |
| AT1G66960.2 | Thale cress | mitochondrion | 66.01 | 21.63 |
| CDY35103 | Canola | mitochondrion | 62.45 | 20.05 |
| CDX87420 | Canola | cytosol | 60.47 | 19.92 |
| CDX88493 | Canola | cytosol | 60.47 | 19.67 |
| CDY38925 | Canola | cytosol, nucleus, plasma membrane | 50.59 | 17.39 |
| CDY50938 | Canola | cytosol | 49.41 | 16.38 |
| CDX93093 | Canola | cytosol | 49.41 | 16.28 |
| CDY29797 | Canola | cytosol | 47.83 | 15.9 |
| CDX77512 | Canola | cytosol | 48.62 | 15.83 |
| CDY25392 | Canola | cytosol | 47.43 | 15.77 |
| CDX85104 | Canola | cytosol | 46.64 | 15.45 |
| CDY52589 | Canola | cytosol | 43.08 | 14.99 |
| CDY49432 | Canola | cytosol | 43.08 | 14.99 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 43.87 | 14.66 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 43.08 | 14.36 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 43.08 | 14.36 |
| Zm00001d024337_P001 | Maize | cytosol | 40.71 | 14.25 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 40.71 | 13.98 |
| EES13537 | Sorghum | cytosol | 41.9 | 13.91 |
| Os08t0223900-00 | Rice | cytosol | 43.08 | 13.89 |
| CDX89541 | Canola | cytosol | 7.11 | 12.24 |
| CDX89540 | Canola | endoplasmic reticulum, golgi, plastid | 21.34 | 10.69 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 22.53 | 9.73 |
| CDY20917 | Canola | cytosol | 11.46 | 7.07 |
| Solyc12g035460.1.1 | Tomato | cytosol | 3.56 | 4.0 |
| CDY08878 | Canola | cytosol | 2.77 | 3.78 |
| CDX85103 | Canola | cytosol | 1.58 | 3.77 |
| CDY72111 | Canola | cytosol | 3.16 | 1.94 |
| CDY34478 | Canola | cytosol, extracellular | 1.58 | 1.07 |
| CDY63677 | Canola | cytosol | 0.4 | 1.05 |
Protein Annotations
| EnsemblPlants:CDY20916 | EnsemblPlantsGene:GSBRNA2T00013277001 | Gene3D:1.50.10.20 | GO:A0A078G632 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:PFTB_repeat | InterPro:SQ_cyclase_N | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | PFAM:PF00432 |
| PFAM:PF13249 | ProteinID:CDY20916 | ProteinID:CDY20916.1 | SUPFAM:SSF48239 | UniParc:UPI0004EDAD1E | UniProt:A0A078G632 |
| MapMan:9.1.4.3 | : | : | : | : | : |
Description
BnaC06g01360DBnaC06g01360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G632]
Coordinates
chrLK032114:+:330645..331915
Molecular Weight (calculated)
29404.7 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.176
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQQFLKEAK FEPVIPPVRI DDGEGITYEK ATNALRRGVA FFSALQASDG HWPGENGGTL FLLPPLVFCL YVTGHLEEVF KAEHYKEMLR YIYCHQNEDG
101: GWGLHIESKS FMFTTVLTTY ACVFSEWVQK EDEKTRADGP GNGFLTMVIL GIYDWSGTNP MPPELWLLPS CLPIHLGKLL CHTRMVYMPM SYLYGKRFVG
201: PITPLIMQLR EELYLQPYEE INWNKARRLY AKEDMYYPHP LIQNLIWDTL HVR
101: GWGLHIESKS FMFTTVLTTY ACVFSEWVQK EDEKTRADGP GNGFLTMVIL GIYDWSGTNP MPPELWLLPS CLPIHLGKLL CHTRMVYMPM SYLYGKRFVG
201: PITPLIMQLR EELYLQPYEE INWNKARRLY AKEDMYYPHP LIQNLIWDTL HVR
001: MKKTWRIIIM WRLKVGEGKG KDPYLFSSNN FVGRQTWEFD PKAGTREERT AVEEARRSFF DNRSRVKPSS DLLWKMQFLK EAKFEQVIPP VKIDGGEAIT
101: YEKATNALRR GVAFLSALQA SDGHWPGEFT GPLCMLPPLV FCLYITGHLE EVFDAEHRKE MLRYIYCHQN EDGGWGFHIE SKSIMFTTTL NYICLRILGV
201: GPDGGLENAC KRARQWILSH GGVIYIPCWG KVWLSVLGIY DWSGVNPMPP EIWLLPYFLP IHLGKAFSYT RITYMPISYL YGKKFVGQIT PLIMQLREEL
301: HLQPYEEINW NKARHLCAKE DKYYPHPLVQ DLIWDALHTF VEPLLASWPI NKLVRKKALQ VAMKHIHYED ENSHYITIGC IEKNLCMLAC WIDNPDGNHF
401: KKHLSRIPDM MWVAEDGMKM QCFGSQLWMT GFAVQALLAS DPRDETYDVL RRAHDYIKKS QVRDNPSGDF KSMYRHISKG GWTLSDRDHG WQVSDCTAEA
501: AKCCMLLSTM PTDITGEKIN LEQLYDSVNL MLSLQSENGG FTAWEPVRAY KWMELMNPTD LFANAMTERE YTECTSAVLQ ALVIFNQLYP DHRTKEITKS
601: IEKAVQFIES KQLRDGSWYG SWGICFTYGT WFALCGLAAI GKTYNNCLSM RDGVHFLLNI QNEDGGWGES YMSCPEQRYI PLEGNRSNVV QTAWAMMALI
701: HAGQAKRDLI PLHSAAKFII TSQLENGDFP QQELLGASMS TCMLHYSTYK DIFPPWALAE YRKAAFIHHA DL
101: YEKATNALRR GVAFLSALQA SDGHWPGEFT GPLCMLPPLV FCLYITGHLE EVFDAEHRKE MLRYIYCHQN EDGGWGFHIE SKSIMFTTTL NYICLRILGV
201: GPDGGLENAC KRARQWILSH GGVIYIPCWG KVWLSVLGIY DWSGVNPMPP EIWLLPYFLP IHLGKAFSYT RITYMPISYL YGKKFVGQIT PLIMQLREEL
301: HLQPYEEINW NKARHLCAKE DKYYPHPLVQ DLIWDALHTF VEPLLASWPI NKLVRKKALQ VAMKHIHYED ENSHYITIGC IEKNLCMLAC WIDNPDGNHF
401: KKHLSRIPDM MWVAEDGMKM QCFGSQLWMT GFAVQALLAS DPRDETYDVL RRAHDYIKKS QVRDNPSGDF KSMYRHISKG GWTLSDRDHG WQVSDCTAEA
501: AKCCMLLSTM PTDITGEKIN LEQLYDSVNL MLSLQSENGG FTAWEPVRAY KWMELMNPTD LFANAMTERE YTECTSAVLQ ALVIFNQLYP DHRTKEITKS
601: IEKAVQFIES KQLRDGSWYG SWGICFTYGT WFALCGLAAI GKTYNNCLSM RDGVHFLLNI QNEDGGWGES YMSCPEQRYI PLEGNRSNVV QTAWAMMALI
701: HAGQAKRDLI PLHSAAKFII TSQLENGDFP QQELLGASMS TCMLHYSTYK DIFPPWALAE YRKAAFIHHA DL
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G66960]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.