CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89541	Canola	cytosol	33.67	22.45
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	30.61	16.95
EES08419	Sorghum	cytosol, mitochondrion, plastid	29.59	14.57
CDY20916	Canola	cytosol	30.61	11.86
CDY29797	Canola	cytosol	88.78	11.43
VIT_04s0008g03000.t01	Wine grape	cytosol	35.71	11.4
CDY25392	Canola	cytosol	86.73	11.17
CDY38925	Canola	cytosol, nucleus, plasma membrane	64.29	8.56
TraesCS2B01G407300.1	Wheat	cytosol	32.65	7.26
CDX87420	Canola	cytosol	55.1	7.03
CDX88493	Canola	cytosol	54.08	6.81
CDY52589	Canola	cytosol	50.0	6.74
CDY49432	Canola	cytosol	50.0	6.74
CDY35103	Canola	mitochondrion	52.04	6.47
Zm00001d008674_P001	Maize	mitochondrion	33.67	6.37
Os02t0139500-02	Rice	cytosol	22.45	6.21
CDX87419	Canola	cytosol	46.94	6.01
CDY57947	Canola	cytosol	46.94	6.0
CDX88494	Canola	endoplasmic reticulum, plasma membrane	46.94	5.93
CDX77512	Canola	cytosol	35.71	4.5
Zm00001d053889_P004	Maize	cytosol	34.69	4.47
CDY50938	Canola	cytosol	34.69	4.46
CDX85104	Canola	cytosol	34.69	4.45
TraesCS2D01G387000.1	Wheat	cytosol, plastid	34.69	4.39
TraesCS6A01G110200.1	Wheat	mitochondrion	33.67	4.38
TraesCS6D01G098800.1	Wheat	mitochondrion	33.67	4.31
CDX93093	Canola	cytosol	33.67	4.3
EES06259	Sorghum	cytosol	32.65	4.23
Os02t0139700-01	Rice	cytosol	32.65	4.22
Zm00001d015234_P002	Maize	cytosol	32.65	4.2
HORVU6Hr1G019840.10	Barley	mitochondrion	32.65	4.05
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	30.61	3.96
TraesCS5D01G011800.1	Wheat	mitochondrion	30.61	3.95
TraesCS5D01G006600.1	Wheat	cytosol	30.61	3.95
TraesCS5D01G006700.1	Wheat	cytosol	30.61	3.95
TraesCS6D01G098600.1	Wheat	cytosol	33.67	3.89
TraesCS5A01G004900.1	Wheat	mitochondrion	29.59	3.82
TraesCS6B01G139000.1	Wheat	golgi	29.59	3.82
TraesCS6A01G110800.1	Wheat	cytosol, golgi	29.59	3.82
EES06258	Sorghum	cytosol	29.59	3.81
CDY08878	Canola	cytosol	7.14	3.78
TraesCS6D01G099400.2	Wheat	cytosol	30.61	3.77
TraesCS6B01G138500.1	Wheat	cytosol	26.53	3.61
TraesCS5B01G004800.1	Wheat	cytosol	25.51	3.36
PGSC0003DMT400062376	Potato	extracellular, vacuole	6.12	3.11
CDX85103	Canola	cytosol	3.06	2.83
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	18.37	2.83
CDX79277	Canola	cytosol	19.39	2.77
Zm00001d008671_P001	Maize	cytosol	13.27	2.45
VIT_04s0008g02980.t01	Wine grape	mitochondrion	3.06	1.92
CDY20917	Canola	cytosol	7.14	1.71
CDY25386	Canola	cytosol, plasma membrane, plastid	6.12	1.02
CDX89540	Canola	endoplasmic reticulum, golgi, plastid	5.1	0.99
CDY72111	Canola	cytosol	3.06	0.73
VIT_09s0054g01250.t01	Wine grape	cytosol	2.04	0.67
CDY34478	Canola	cytosol, extracellular	2.04	0.54
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	2.04	0.47
TraesCS2B01G407200.1	Wheat	cytosol	0.0	0.0
PGSC0003DMT400048787	Potato	cytosol	0.0	0.0
KXG29303	Sorghum	cytosol	0.0	0.0
CDY63677	Canola	cytosol	0.0	0.0
CDY40048	Canola	cytosol	0.0	0.0
VIT_04s0008g02990.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:CDY29789	EnsemblPlantsGene:GSBRNA2T00043672001	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	ProteinID:CDY29789
ProteinID:CDY29789.1	SEG:seg	SUPFAM:SSF48239	UniParc:UPI0004EEE725	UniProt:A0A078GXB4	MapMan:35.1

Description

BnaC05g32010DBnaC05g32010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXB4]

Coordinates

chrLK032244:-:108427..108801

Molecular Weight (calculated)

11245.5 Da

IEP (calculated)

10.266

GRAVY (calculated)

-0.511

Length

98 amino acids

Sequence
(BLAST)

1: MEQARQNFSL NRSRFKTNGD LLWGMQFLSE KKFEQKIPRV RVEDAEKITY KDAKTAMRRG ILYLAALQAK DGHWPAENSG IMILNSPFVS SCSFSNSL

Best Arabidopsis Sequence Match ( AT1G78500.1 )
(BLAST)

001: MWRLKIGAKG GDETHLFTTN NYTGRQTWEF DADACSPEEL AEVDEARQNF SINRSRFKIS ADLLWRMQFL REKKFEQKIP RVEIGDAENI TYKDAKTALR
101: RGILYFKALQ AEDGHWPAEN SGCLFFEAPF VICLYITGHL EKILTLEHRK ELLRYMYNHQ NEDGGWGIHV EGQSAMFCTV INYICLRILG VEADLDDIKG
201: SGCARARKWI LDHGGATYTP LIGKAWLSIL GVYDWSGCKP IPPEVWMLPT FSPFNGGTLW IYFRDIFMGV SYLYGKKFVA TPTPLILQLR EELYPQPYDK
301: ILWSQARNQC AKEDLYYPQS FLQEMFWKCV HILSENILNR WPCNKLIRQK ALRTTMELLH YQDEASRYFT GGCVPKPFHM LACWVEDPDG DYFKKHLARV
401: PDYIWIGEDG LKIQSFGSQL WDTAFSLQVM LAYQDVDDDD DEIRSTLIKG YSFLNKSQLT QNPPGDHRKM LKDIAKGGWT FSDQDQGWPV SDCTAESLEC
501: CLVFGSMPSE LIGEKMDVER LYDAVNLLLY FQSKNGGITV WEAARGRTWL EWLSPVEFME DTIVEHEYVE CTGSAIVALA RFLKEFPEHR REEVEKFIKN
601: AVKYIESFQM PDGSWYGNWG VCFMYGTFFA VRGLVAAGKT YQNCEPIRKA VQFILETQNV EGGWGESYLS CPNKKYTLLE GNRTNVVNTG QALMVLIMGG
701: QMERDPLPVH RAAKVLINSQ LDNGDFPQEE IMGVFKMNVM VHYATYRNIF TLWALTYYTK ALRVPLC

Arabidopsis Description

PEN6Seco-amyrin synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9SYN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.