Factsheet for TraesCS6B01G138500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0139500-02	Rice	cytosol	40.56	82.49
TraesCS6D01G098600.1	Wheat	cytosol	96.11	81.51
TraesCS2B01G407200.1	Wheat	cytosol	8.19	78.67
GSMUA_Achr7P15790_001	Banana	cytosol	62.64	74.3
TraesCS6B01G139000.1	Wheat	golgi	75.0	71.05
PGSC0003DMT400073861	Potato	mitochondrion	46.81	68.36
VIT_09s0054g01250.t01	Wine grape	cytosol	27.64	67.0
TraesCS2B01G407300.1	Wheat	cytosol	40.97	66.89
KRH74134	Soybean	endoplasmic reticulum	70.14	66.71
VIT_11s0065g00640.t01	Wine grape	cytosol	69.31	65.66
AT2G07050.1	Thale cress	cytosol	67.92	64.43
VIT_09s0018g00630.t01	Wine grape	cytosol	67.08	63.72
CDY50938	Canola	cytosol	67.5	63.7
Bra013167.1-P	Field mustard	cytosol	67.78	63.62
CDX93093	Canola	cytosol	67.78	63.54
VIT_09s0054g01550.t01	Wine grape	cytosol	66.67	63.32
CDX85104	Canola	cytosol	66.94	63.09
VIT_09s0054g01180.t01	Wine grape	cytosol	56.11	62.83
TraesCS5B01G545900.1	Wheat	cytosol	63.75	62.79
CDX77512	Canola	cytosol	67.64	62.68
VIT_09s0054g01120.t01	Wine grape	cytosol	61.39	62.08
VIT_09s0054g01110.t01	Wine grape	cytosol	67.36	60.93
Solyc04g070980.2.1	Tomato	plastid	64.31	60.92
Solyc04g050670.1.1	Tomato	cytosol	13.61	60.49
TraesCS5B01G004800.1	Wheat	cytosol	61.25	59.35
Bra014952.1-P	Field mustard	cytosol	65.0	55.45
TraesCS7B01G131400.1	Wheat	mitochondrion	57.5	55.13
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.14	54.41
TraesCS4B01G390900.1	Wheat	extracellular, plasma membrane	47.5	52.45
TraesCS2B01G049300.2	Wheat	mitochondrion	54.72	52.19
TraesCS6B01G139500.1	Wheat	mitochondrion	55.0	51.56
VIT_09s0054g01090.t01	Wine grape	cytosol	66.67	50.58
TraesCS4B01G390800.1	Wheat	mitochondrion	51.39	49.14
VIT_04s0008g02990.t01	Wine grape	cytosol	6.11	46.81
VIT_04s0008g03000.t01	Wine grape	cytosol	18.75	43.97
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.44	43.59
PGSC0003DMT400048787	Potato	cytosol	3.47	43.1
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.14	37.82
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	22.36	37.44
CDY29789	Canola	cytosol	3.61	26.53

Protein Annotations

EnsemblPlants:TraesCS6B01G138500.1	EnsemblPlantsGene:TraesCS6B01G138500	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27
PFAM:PF13243	PFAM:PF13249	SEG:seg	SUPFAM:SSF48239	TIGR:cd02892	TIGRFAMs:TIGR01787
MapMan:9.1.4.3	MapMan:9.1.5.3	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:135863324..135869347

Molecular Weight (calculated)

81246.0 Da

IEP (calculated)

6.452

GRAVY (calculated)

-0.197

Length

720 amino acids

Sequence
(BLAST)

001: MGLIFSLNNS HVIAKHLHFL QFAELGAPKL DVPGIKLQEH EDVTEEAVLT SLKRAIGQLS TLQAHDGHWP GDIAGPMFLL PGLVIALHST GALNTVLSSE
101: HQKEIRRYLY NHQNKDGGWG LHIEGPSTMF GSVLNYVTLR LLGEGSDSED GAIQLAQNWI LDHGGATFTT SWGKFWLSVL GVFDWSGNNP LLPELWLLPY
201: CLPFHPGRMW SHCRMVYFPM SYIYGKRFVG PITPTVVNLR KELYKVPYDE IDWDKARNQC AKEDLYCPHP LGQDILWTTL HKFVEPVLSH WPGSKLREKA
301: LKNAMQHIHY EDENTQYVCS GAVGKVLNML CCWIEDPNSE EFKLHIPRIY DYLWVAEDGM KMQGYNGSQL WDTAFTVEAI LATELTEEFC PTLKLAHDYI
401: KNSQVLHDCH GDLSDWYRHI SKGAWTFSTT DHAWPVSDCT AVGLKASLLL SKISPKMVGV SIEANRLYDA VNCLLSWMNG NGGFASYELT RSYAWLEFLN
501: PSEIFEDIMI DHPVVECTSA VIQALAAFRK HYPEHRREEI DKCIHKGDNF ILSIQRSDGS WYGSWGICFT HGTWSAVRGL VAAGRTFKNC PAIRKACDFL
601: LSKEVPSGGW GESYLSCRDK VYTELEGRRP HVVNTSWAML ALIDAGQAER DPGPLHRAAK VLINLQLGDG EFPQQEIIGI FARNCAITYS QYRNIFPIWA
701: LGEYRCRVLG SRAPEGHGDA

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.