Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G390800.1 | Wheat | mitochondrion | 96.47 | 83.53 |
| Os11t0285000-01 | Rice | plasma membrane | 75.61 | 64.87 |
| TraesCS7B01G131400.1 | Wheat | mitochondrion | 70.55 | 61.25 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 67.64 | 58.41 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 6.13 | 53.33 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 61.81 | 52.47 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 52.45 | 47.5 |
| TraesCS5B01G545900.1 | Wheat | cytosol | 51.99 | 46.37 |
| TraesCS6B01G139000.1 | Wheat | golgi | 53.68 | 46.05 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 48.47 | 42.53 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 27.76 | 41.04 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.6 | 30.0 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G390900.1 | EnsemblPlantsGene:TraesCS4B01G390900 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 |
| PFAM:PF13243 | PFAM:PF13249 | SignalP:SignalP-noTM | SUPFAM:SSF48239 | TIGR:cd02892 | TIGRFAMs:TIGR01787 |
| MapMan:9.1.4.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:666706173..666722136
Molecular Weight (calculated)
74479.6 Da
IEP (calculated)
6.693
GRAVY (calculated)
-0.223
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSCKHKMGT GLVITVELCS LCHSLQIFSL HVTGTLNVIL SSEHRREICR YIYNHQNEDG GWSTQVLTKS TMFGSCLNYA TLRLLGEISD GKNDALARGR
101: AWILSHGSAT AAPQWAKIWL SVIGAYDWSG NNAIIPELWM APHFLPFHPA RFWSFARMVY MPMAYLYGKK FVGPITQTIL EIREELYNIP YNEVDWNRAR
201: DSCAKEDLKY TRSPVQHIVW TCLNKFVEPM LNVWPFNKLR AISLSNLMKH IYYEDEATYH IGLCPINKAL NMICCWVENP NSDAFGAHLP RIYDYLWLSE
301: DGMKAQVYDG CQSWETSFIV QAIFSTNLID EFGSTLKKAH EFLKSSQVLH DLPSHQNYYR DRSKVSWTLS TADNGWSVPD CTTEIIQALL YLSKVSADIV
401: GLPIKDERLH DAIDCLLSYA NDDGTFSSSE SKRTASWTEV LNPSESFRNI VVDYPHVECT SSAMQCFILF NELYPQYCAE EIKRCIKKAA IFIENQQKNG
501: SWYDTWGVCF TYGAFFAIKG LVAAGRTYDN SIHVRNGCNF LISKQLSGGG WGESYLSSEN EDYVHSGSPH AVSTAWAMLA LIYSGQTERD PEPLYRSTKQ
601: LIKMQMETGD FPQQEHVGCF NSSLYFNYPN YRNLFPIWAL GEFRCRLLGM KK
101: AWILSHGSAT AAPQWAKIWL SVIGAYDWSG NNAIIPELWM APHFLPFHPA RFWSFARMVY MPMAYLYGKK FVGPITQTIL EIREELYNIP YNEVDWNRAR
201: DSCAKEDLKY TRSPVQHIVW TCLNKFVEPM LNVWPFNKLR AISLSNLMKH IYYEDEATYH IGLCPINKAL NMICCWVENP NSDAFGAHLP RIYDYLWLSE
301: DGMKAQVYDG CQSWETSFIV QAIFSTNLID EFGSTLKKAH EFLKSSQVLH DLPSHQNYYR DRSKVSWTLS TADNGWSVPD CTTEIIQALL YLSKVSADIV
401: GLPIKDERLH DAIDCLLSYA NDDGTFSSSE SKRTASWTEV LNPSESFRNI VVDYPHVECT SSAMQCFILF NELYPQYCAE EIKRCIKKAA IFIENQQKNG
501: SWYDTWGVCF TYGAFFAIKG LVAAGRTYDN SIHVRNGCNF LISKQLSGGG WGESYLSSEN EDYVHSGSPH AVSTAWAMLA LIYSGQTERD PEPLYRSTKQ
601: LIKMQMETGD FPQQEHVGCF NSSLYFNYPN YRNLFPIWAL GEFRCRLLGM KK
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.