Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G122220.1 | Barley | mitochondrion | 87.69 | 84.45 |
| Zm00001d035392_P001 | Maize | cytosol | 24.21 | 75.64 |
| Os11t0189600-01 | Rice | cytosol, mitochondrion | 77.29 | 74.44 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 7.39 | 72.0 |
| OQU83221 | Sorghum | cytosol | 74.56 | 71.15 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 62.79 | 63.75 |
| TraesCS6B01G139000.1 | Wheat | golgi | 64.43 | 61.97 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 35.98 | 59.64 |
| CDX85103 | Canola | cytosol | 8.21 | 56.6 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 54.45 | 53.57 |
| TraesCS7B01G131400.1 | Wheat | mitochondrion | 54.58 | 53.13 |
| TraesCS4B01G390900.1 | Wheat | extracellular, plasma membrane | 46.37 | 51.99 |
| Zm00001d035389_P001 | Maize | cytosol, nucleus, peroxisome | 41.31 | 51.8 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 52.12 | 50.46 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 52.53 | 50.0 |
| TraesCS4B01G390800.1 | Wheat | mitochondrion | 49.93 | 48.47 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 0.55 | 5.97 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G545900.1 | EnsemblPlantsGene:TraesCS5B01G545900 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF27 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg | SUPFAM:SSF48239 |
| TIGR:cd02892 | TIGRFAMs:TIGR01787 | TMHMM:TMhelix | MapMan:9.1.4.3 | : | : |
Description
No Description!
Coordinates
chr5B:-:697964095..698001949
Molecular Weight (calculated)
83189.4 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.245
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMQLAKANP QKVDLPVVKL GEHEDVTEEA TWSSLKRAVS RVCNLQAHDG HWPADYGGLL FILPGLITTL YVTGALNTVL SLEHKKEMLR YIYNHQNEDG
101: GWGMHIEGHS TMIGSSLNYV ALRLLGEGPN GGDGAIEKGR NWILDHGGAT FAPSWGKFWL LVLGAYDWSG TNPVPPELWL LPYHLPFHPG RFACYIRMVY
201: LPMSYIYGRK FGGPVTPVIL ELRNELYRVP YDEINWNKAR TECAKEDMYK PHSSFHDILS FIINKFVEPV LSRWPWRKLR EKALATVMRH IHYEDECTRY
301: INLGAVPKPL NMLACWIEDP NLEAFKCHIP RVYDYIWIAE DGMKMQIYDG SQVWDAGFTV EALVATDLVN ELGPTLERAH SFLKKSQLLE DCPRDFNHWY
401: RHICKGGWTF TTADDGWQVS DCTATALKAC LLLSKISPEI VGKPLEISRQ YDGINVLMSF MNNNGGISSF EPVRSYAWLE DFNPSDSFGR VMIEYSYVEC
501: TSSSIQCLAL FRELNPGHRK EEVENCIRKG ADFIEISQRR DGSWYGSWGI CFTYATWFAV EGLVSVGRTF KNSAAIRKAC EFLLSKELPS GGWGESYLSS
601: HDEVYTNLKG NRPHGTHTAW AMLTLIDAGQ AERDPMPLHR AAKVLLNLQL DDGEFPQQEI IGVFLQTAMA SYSQHRNVFP IWALTEYRRR VLLAVTKMAA
701: AAFILRPDHT GFWREWFEGD QIHAWGGEAG T
101: GWGMHIEGHS TMIGSSLNYV ALRLLGEGPN GGDGAIEKGR NWILDHGGAT FAPSWGKFWL LVLGAYDWSG TNPVPPELWL LPYHLPFHPG RFACYIRMVY
201: LPMSYIYGRK FGGPVTPVIL ELRNELYRVP YDEINWNKAR TECAKEDMYK PHSSFHDILS FIINKFVEPV LSRWPWRKLR EKALATVMRH IHYEDECTRY
301: INLGAVPKPL NMLACWIEDP NLEAFKCHIP RVYDYIWIAE DGMKMQIYDG SQVWDAGFTV EALVATDLVN ELGPTLERAH SFLKKSQLLE DCPRDFNHWY
401: RHICKGGWTF TTADDGWQVS DCTATALKAC LLLSKISPEI VGKPLEISRQ YDGINVLMSF MNNNGGISSF EPVRSYAWLE DFNPSDSFGR VMIEYSYVEC
501: TSSSIQCLAL FRELNPGHRK EEVENCIRKG ADFIEISQRR DGSWYGSWGI CFTYATWFAV EGLVSVGRTF KNSAAIRKAC EFLLSKELPS GGWGESYLSS
601: HDEVYTNLKG NRPHGTHTAW AMLTLIDAGQ AERDPMPLHR AAKVLLNLQL DDGEFPQQEI IGVFLQTAMA SYSQHRNVFP IWALTEYRRR VLLAVTKMAA
701: AAFILRPDHT GFWREWFEGD QIHAWGGEAG T
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.