Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035392_P001 | Maize | cytosol | 26.89 | 88.03 |
| Os11t0189600-01 | Rice | cytosol, mitochondrion | 78.07 | 78.79 |
| HORVU5Hr1G122220.1 | Barley | mitochondrion | 77.42 | 78.13 |
| TraesCS5B01G545900.1 | Wheat | cytosol | 71.15 | 74.56 |
| KXG29303 | Sorghum | cytosol | 7.57 | 70.73 |
| EES06259 | Sorghum | cytosol | 68.67 | 69.48 |
| EES06258 | Sorghum | cytosol | 68.67 | 69.12 |
| KXG28324 | Sorghum | cytosol | 24.54 | 68.36 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 17.1 | 65.83 |
| Zm00001d035389_P001 | Maize | cytosol, nucleus, peroxisome | 46.74 | 61.41 |
| CDX85103 | Canola | cytosol | 8.36 | 60.38 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 4.96 | 56.72 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 47.0 | 55.99 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 54.96 | 55.91 |
| EER90340 | Sorghum | cytosol | 53.26 | 55.59 |
| OQU80182 | Sorghum | mitochondrion | 52.09 | 54.81 |
| EES14558 | Sorghum | cytosol | 53.79 | 54.35 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 54.83 | 52.96 |
| OQU77014 | Sorghum | cytosol | 45.3 | 52.34 |
| KXG28793 | Sorghum | mitochondrion | 52.22 | 52.22 |
| KXG35171 | Sorghum | extracellular | 42.69 | 51.82 |
| EES13537 | Sorghum | cytosol | 51.04 | 51.31 |
| EES04501 | Sorghum | cytosol | 49.48 | 51.29 |
| KXG23805 | Sorghum | cytosol | 49.61 | 50.2 |
| EES17376 | Sorghum | mitochondrion | 49.48 | 50.0 |
| OQU91432 | Sorghum | cytosol | 51.57 | 49.75 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A1B6PR67 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 | GO:GO:0016866 | ProteinID:KXG28160.1 | ProteinID:KXG28161.1 |
| EnsemblPlants:OQU83221 | ProteinID:OQU83221 | ProteinID:OQU83221.1 | ProteinID:OQU83222.1 | ProteinID:OQU83224.1 | PFAM:PF13243 |
| PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF27 | EnsemblPlantsGene:SORBI_3005G092500 | InterPro:SQ_cyclase_C |
| InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | TMHMM:TMhelix | InterPro:Terpene_synthase_CS |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00081AE33B | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:14231346..14266725
Molecular Weight (calculated)
87529.5 Da
IEP (calculated)
6.287
GRAVY (calculated)
-0.290
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVSERS SPWLGSVNNL LGRQEWVLDP DDLGTPEERA QVDRARREFA DHRFERKHSS DLLMRIQYAK ENPHNHLGDL PPAVKLQEND DDIITEEAVW
101: TSVKRAVNRV CNLQAHDGHW PADYGGLLFL MPGLIITLYV SGVLNAVLSS EHQIEILRYI YNHQNEDGGW GLHIEGHSTM LSSALNYVAL RLLGECPNGG
201: DGAMEKGRNW ILDHGGAIFM AAWGKFWLSV LGVYDWSGNN PVPPELWLLP HYLPFHPGRV VCYCRMVYMP MSYIYGRRFV GPITPLVLEL RKELYTDAYD
301: EIDWNKARTE CAKEDMYKPH SLVLDISMTI LHKFEQIMFH WPWRKLRNKA LAFTMRHVHY EDESTHYINL GGVPKVLNML ARWIEDPNSE AFKCHIARVY
401: DFLWIAEDGM KMQIYDGSQL WDATFTVEVL LATGLVKELG PTLKRAHSFI KNSQLLENCL GDLNYWHRHI SKGGWTFSTA DDGWQVSDCS ANGLKVCLLL
501: STISPEIVGE PLEIERQFDA VNCLMSLMNN DGGFSAFEPT RSSPWLEHIN PSEAFGRTMI DYPYVECTSS AIQCLALFRK LNPGHRKEEV ENCINKGADF
601: IENIQRTDGS WYGSWGVCFT YATWFGVSGL VCAGRTFENS TAIRKACDFL LSKELPCGGW GESWLSSHNE VYTNLRGNRH HGTHTAWALL ALIEAGQAER
701: DPMPLHRAAK TLLNLQLEDG EFPQQEIIGV FMQTAMASYS QYRNIFPIWA LTEYRRRVLL AGKKSE
101: TSVKRAVNRV CNLQAHDGHW PADYGGLLFL MPGLIITLYV SGVLNAVLSS EHQIEILRYI YNHQNEDGGW GLHIEGHSTM LSSALNYVAL RLLGECPNGG
201: DGAMEKGRNW ILDHGGAIFM AAWGKFWLSV LGVYDWSGNN PVPPELWLLP HYLPFHPGRV VCYCRMVYMP MSYIYGRRFV GPITPLVLEL RKELYTDAYD
301: EIDWNKARTE CAKEDMYKPH SLVLDISMTI LHKFEQIMFH WPWRKLRNKA LAFTMRHVHY EDESTHYINL GGVPKVLNML ARWIEDPNSE AFKCHIARVY
401: DFLWIAEDGM KMQIYDGSQL WDATFTVEVL LATGLVKELG PTLKRAHSFI KNSQLLENCL GDLNYWHRHI SKGGWTFSTA DDGWQVSDCS ANGLKVCLLL
501: STISPEIVGE PLEIERQFDA VNCLMSLMNN DGGFSAFEPT RSSPWLEHIN PSEAFGRTMI DYPYVECTSS AIQCLALFRK LNPGHRKEEV ENCINKGADF
601: IENIQRTDGS WYGSWGVCFT YATWFGVSGL VCAGRTFENS TAIRKACDFL LSKELPCGGW GESWLSSHNE VYTNLRGNRH HGTHTAWALL ALIEAGQAER
701: DPMPLHRAAK TLLNLQLEDG EFPQQEIIGV FMQTAMASYS QYRNIFPIWA LTEYRRRVLL AGKKSE
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.