Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030821_P001 | Maize | cytosol | 10.14 | 85.33 |
| Zm00001d030813_P001 | Maize | cytosol | 31.06 | 79.67 |
| Zm00001d030822_P001 | Maize | cytosol | 24.56 | 78.28 |
| KXG23805 | Sorghum | cytosol | 86.85 | 72.39 |
| EES17376 | Sorghum | mitochondrion | 82.41 | 68.6 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 63.71 | 62.52 |
| KXG29303 | Sorghum | cytosol | 7.45 | 57.32 |
| EER90340 | Sorghum | cytosol | 64.34 | 55.31 |
| OQU77014 | Sorghum | cytosol | 57.84 | 55.05 |
| Zm00001d030824_P001 | Maize | cytosol | 27.58 | 53.21 |
| EES14558 | Sorghum | cytosol | 61.65 | 51.32 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 59.9 | 50.2 |
| OQU80182 | Sorghum | mitochondrion | 56.89 | 49.31 |
| KXG28324 | Sorghum | cytosol | 21.39 | 49.09 |
| OQU91432 | Sorghum | cytosol | 61.65 | 48.99 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 60.86 | 48.42 |
| KXG28793 | Sorghum | mitochondrion | 58.64 | 48.3 |
| EES04501 | Sorghum | cytosol | 53.88 | 46.01 |
| EES06259 | Sorghum | cytosol | 54.2 | 45.18 |
| Zm00001d030814_P001 | Maize | cytosol | 18.86 | 44.57 |
| EES06258 | Sorghum | cytosol | 53.72 | 44.55 |
| OQU83221 | Sorghum | cytosol | 51.82 | 42.69 |
| EES13537 | Sorghum | cytosol | 47.07 | 38.98 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.75 | 30.0 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 5.71 | 18.09 |
| KRH38081 | Soybean | cytosol | 0.32 | 2.7 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:A0A1B6QB99 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| GO:GO:0016866 | EnsemblPlants:KXG35171 | ProteinID:KXG35171 | ProteinID:KXG35171.1 | PFAM:PF13243 | PFAM:PF13249 |
| ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | EnsemblPlantsGene:SORBI_3002G142300 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
| SUPFAM:SSF48239 | SignalP:SignalP-noTM | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI00081AE925 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:23280102..23315614
Molecular Weight (calculated)
72472.8 Da
IEP (calculated)
7.517
GRAVY (calculated)
-0.224
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLQPFWIFA LHITGSIDAV LSKEHIREIC RHIYNHQNED GGWGFNILDE SAMFGTCLNY ATLRLLGEAH NDELAKGRAW ILSHGTATAA PQWAKILLSV
101: IGVYDWRGNN PVVPELWLVP RFLPIHPGRF WCFTRITYMS IAYLYGKKFV GPITPTILAL RDELYSWPYD KIDWSKARNA CAKEDMRYKP SVLFNGISTC
201: LNTFVEPVLN CWPFYKLREK ALSHILEHIH YEDETTQYIG LCPVTKALNM ICCWVENPNS DALKQHIPRI HDYLWIAEDG MKTKIYNGAQ NWELALILQA
301: LFSADAANEY GPAIERALSY TKKAQMTTNP PGDPSYWFRH RSKGSWPLST VDNGWASPDT SAETTKAILL LSKIYPNLIE HPEEQWLLSS VDCLLSFMNK
401: DGSVSSMECQ RTYSWLEILN PLESFRNIVA DYPTVECTSS VMHALILFRK INPEYRSKEI KDYVNKAVIF IENNQKKDGS WYGTWGICFV YGTLYAIKGL
501: IAAGRNYENS ICIRKACKFF ISTQLKTGGW GESFLSCERQ VYVEGHSTHA VQTAWAMLAL IYAGQMERDP TPLHRAAKVL INMQFETGDY PQQEHVGNTN
601: SSVYFNYPNY RILFPIWALG EYRRKLFAKN N
101: IGVYDWRGNN PVVPELWLVP RFLPIHPGRF WCFTRITYMS IAYLYGKKFV GPITPTILAL RDELYSWPYD KIDWSKARNA CAKEDMRYKP SVLFNGISTC
201: LNTFVEPVLN CWPFYKLREK ALSHILEHIH YEDETTQYIG LCPVTKALNM ICCWVENPNS DALKQHIPRI HDYLWIAEDG MKTKIYNGAQ NWELALILQA
301: LFSADAANEY GPAIERALSY TKKAQMTTNP PGDPSYWFRH RSKGSWPLST VDNGWASPDT SAETTKAILL LSKIYPNLIE HPEEQWLLSS VDCLLSFMNK
401: DGSVSSMECQ RTYSWLEILN PLESFRNIVA DYPTVECTSS VMHALILFRK INPEYRSKEI KDYVNKAVIF IENNQKKDGS WYGTWGICFV YGTLYAIKGL
501: IAAGRNYENS ICIRKACKFF ISTQLKTGGW GESFLSCERQ VYVEGHSTHA VQTAWAMLAL IYAGQMERDP TPLHRAAKVL INMQFETGDY PQQEHVGNTN
601: SSVYFNYPNY RILFPIWALG EYRRKLFAKN N
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.