Factsheet for Zm00001d030824_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030814_P001	Maize	cytosol	73.09	89.51
Zm00001d030818_P001	Maize	cytosol	55.66	80.53
KRH38081	Soybean	cytosol	9.17	40.54
KXG23805	Sorghum	cytosol	89.3	38.57
Zm00001d035392_P001	Maize	cytosol	22.32	31.2
KXG35171	Sorghum	extracellular	53.21	27.58
Zm00001d052971_P005	Maize	mitochondrion	63.3	27.38
Zm00001d050625_P001	Maize	mitochondrion	54.13	26.66
Zm00001d015239_P007	Maize	mitochondrion	61.47	26.38
Zm00001d013798_P001	Maize	mitochondrion	59.63	25.9
Zm00001d014695_P001	Maize	cytosol	60.55	25.58
Zm00001d008674_P001	Maize	mitochondrion	37.0	23.36
Zm00001d024337_P001	Maize	cytosol	48.01	21.72
Zm00001d053889_P004	Maize	cytosol	45.87	19.74
Zm00001d015234_P002	Maize	cytosol	44.95	19.29
Zm00001d035389_P001	Maize	cytosol, nucleus, peroxisome	28.75	16.12
Zm00001d008671_P001	Maize	cytosol	25.69	15.85
VIT_10s0003g03550.t01	Wine grape	extracellular	2.75	9.0
Zm00001d030813_P001	Maize	cytosol	2.45	3.25
Zm00001d030822_P001	Maize	cytosol	1.83	3.03
Zm00001d030819_P005	Maize	cytosol	2.75	2.39
Zm00001d030821_P001	Maize	cytosol	0.0	0.0
Zm00001d008672_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d030824_P001	EnsemblPlants:Zm00001d030824_T001	EnsemblPlantsGene:Zm00001d030824	Gene3D:1.50.10.20	InterPro:SQ_cyclase_N	InterPro:Terpenoid_cyclase/PrenylTrfase
PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	PFAM:PF13249	ProteinID:ONM01583.1	SEG:seg	SUPFAM:SSF48239
UniParc:UPI00097CD778	UniProt:A0A1R3LZ28	MapMan:9.1.4.3	:	:	:

Description

Cycloartenol synthase

Coordinates

chr1:-:162009110..162015756

Molecular Weight (calculated)

38152.5 Da

IEP (calculated)

6.888

GRAVY (calculated)

-0.448

Length

327 amino acids

Sequence
(BLAST)

001: MWRLKIGEGR GPWMQTVSDF HGRQVWEYDP DAGTEEERSK VEQLRREFTE NRFRRRESQD LLMRMQLTGQ KHLHADDMGA ATKIEDGDEV TEERLRESLR
101: RALGWMSALQ AEDGHWPGDF SGIMYIMPFW IFALHITGSI DVVLSKEHRR EICRHIYNHQ NEDGGWGFNI LDESAMFSTC LNYTALRLLG EVQQEENDGL
201: AKGRAWILSH GTATAAPQWA KILLSVIGVY DWRGNNPVVP ELWLVPRFLP IHPGRFWCFT RITYMSIAFL YGKKFIGPIT PTILELREEL YSLPYVQIDW
301: SKARNSCAKV RHHPSLTFNH YHYSINI

Best Arabidopsis Sequence Match ( AT1G66960.1 )
(BLAST)

001: MWRLKVGEGK GKDPYLFSSN NFVGRQTWEF DPKAGTREER TAVEEARRSF FDNRSRVKPS SDLLWKMQFL KEAKFEQVIP PVKIDGGEAI TYEKATNALR
101: RGVAFLSALQ ASDGHWPGEF TGPLCMLPPL VFCLYITGHL EEVFDAEHRK EMLRYIYCHQ NEDGGWGFHI ESKSIMFTTT LNYICLRILG VGPDGGLENA
201: CKRARQWILS HGGVIYIPCW GKVWLSVLGI YDWSGVNPMP PEIWLLPYFL PIHLGKAFSY TRITYMPISY LYGKKFVGQI TPLIMQLREE LHLQPYEEIN
301: WNKARHLCAK EDKYYPHPLV QDLIWDALHT FVEPLLASWP INKLVRKKAL QVAMKHIHYE DENSHYITIG CIEKNLCMLA CWIDNPDGNH FKKHLSRIPD
401: MMWVAEDGMK MQCFGSQLWM TGFAVQALLA SDPRDETYDV LRRAHDYIKK SQVRDNPSGD FKSMYRHISK GGWTLSDRDH GWQVSDCTAE AAKCCMLLST
501: MPTDITGEKI NLEQLYDSVN LMLSLQSENG GFTAWEPVRA YKWMELMNPT DLFANAMTER EYTECTSAVL QALVIFNQLY PDHRTKEITK SIEKAVQFIE
601: SKQLRDGSWY GSWGICFTYG TWFALCGLAA IGKTYNNCLS MRDGVHFLLN IQNEDGGWGE SYMSCPEQRY IPLEGNRSNV VQTAWAMMAL IHAGQAKRDL
701: IPLHSAAKFI ITSQLENGDF PQQELLGASM STCMLHYSTY KDIFPPWALA EYRKAAFIHH ADL

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G66960]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.