Factsheet for Zm00001d030822_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030819_P005	Maize	cytosol	61.11	32.18
KXG35171	Sorghum	extracellular	78.28	24.56
Zm00001d030813_P001	Maize	cytosol	29.29	23.58
KXG23805	Sorghum	cytosol	88.89	23.25
Zm00001d035392_P001	Maize	cytosol	22.73	19.23
Zm00001d050625_P001	Maize	mitochondrion	60.61	18.07
Zm00001d015239_P007	Maize	mitochondrion	60.1	15.62
Zm00001d014695_P001	Maize	cytosol	57.07	14.6
Zm00001d008671_P001	Maize	cytosol	36.36	13.58
Zm00001d052971_P005	Maize	mitochondrion	51.52	13.49
Zm00001d053889_P004	Maize	cytosol	49.49	12.89
Zm00001d015234_P002	Maize	cytosol	48.48	12.6
Zm00001d013798_P001	Maize	mitochondrion	42.93	11.29
Zm00001d035389_P001	Maize	cytosol, nucleus, peroxisome	26.77	9.09
Zm00001d024337_P001	Maize	cytosol	32.32	8.85
Zm00001d008674_P001	Maize	mitochondrion	20.71	7.92
Zm00001d008672_P001	Maize	cytosol	4.55	7.69
KRH38081	Soybean	cytosol	1.01	2.7
Zm00001d030824_P001	Maize	cytosol	3.03	1.83
Zm00001d030818_P001	Maize	cytosol	2.02	1.77
VIT_10s0003g03550.t01	Wine grape	extracellular	0.51	1.0
Zm00001d030814_P001	Maize	cytosol	1.01	0.75
Zm00001d030821_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d030822_P001	EnsemblPlants:Zm00001d030822_T001	EnsemblPlantsGene:Zm00001d030822	Gene3D:1.50.10.20	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF14	ProteinID:ONM01582.1	SUPFAM:SSF48239	UniParc:UPI0008DB34C9	UniProt:A0A1D6KEL0	MapMan:9.1.4.3

Description

Cycloartenol synthase

Coordinates

chr1:-:161969651..161977432

Molecular Weight (calculated)

22733.0 Da

IEP (calculated)

5.538

GRAVY (calculated)

-0.348

Length

198 amino acids

Sequence
(BLAST)

001: MFVEPVLNYW PLNKLRERAL NHILEHIHYE DETTQYIGIS PVTKALNMIC CWVENPNSDA LKRHIPRIHD YLWIAEDGMN TKIYDGTHNW ELALIIQAML
101: SADAANEYGP TIQRAMEYLK RAQVTTNPPG NPSYWFRHRS KGSWPLSTID NGWGSSDTSA EATKALLMFS KVYPNLVENS NGDEWMLNAV DCLLSFMV

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.