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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008672_P001 Maize cytosol 17.17 77.78
GSMUA_Achr7P15790_001 Banana cytosol 59.06 51.57
PGSC0003DMT400073861 Potato mitochondrion 46.42 49.9
Zm00001d008674_P001 Maize mitochondrion 48.3 49.42
Zm00001d035392_P001 Maize cytosol 21.7 49.15
Zm00001d053889_P004 Maize cytosol 68.3 47.63
Zm00001d015234_P002 Maize cytosol 68.3 47.51
VIT_09s0054g01250.t01 Wine grape cytosol 25.09 44.78
VIT_04s0008g02990.t01 Wine grape cytosol 7.92 44.68
VIT_09s0054g01120.t01 Wine grape cytosol 59.62 44.38
CDX85104 Canola cytosol 62.64 43.46
AT2G07050.1 Thale cress cytosol 61.7 43.08
KRH74134 Soybean endoplasmic reticulum 60.94 42.67
CDX77512 Canola cytosol 62.45 42.6
CDY50938 Canola cytosol 61.13 42.46
CDX93093 Canola cytosol 61.32 42.32
VIT_09s0054g01180.t01 Wine grape cytosol 51.32 42.3
Bra013167.1-P Field mustard cytosol 61.13 42.24
VIT_11s0065g00640.t01 Wine grape cytosol 60.57 42.24
VIT_09s0018g00630.t01 Wine grape cytosol 60.38 42.22
Solyc04g070980.2.1 Tomato plastid 59.25 41.32
VIT_09s0054g01550.t01 Wine grape cytosol 59.06 41.29
VIT_09s0054g01110.t01 Wine grape cytosol 59.62 39.7
EES08419 Sorghum cytosol, mitochondrion, plastid 14.91 39.7
Bra014952.1-P Field mustard cytosol 62.45 39.22
Zm00001d030822_P001 Maize cytosol 13.58 36.36
Zm00001d030821_P001 Maize cytosol 5.09 36.0
Zm00001d050625_P001 Maize mitochondrion 44.72 35.69
Zm00001d052971_P005 Maize mitochondrion 50.38 35.32
Solyc04g050670.1.1 Tomato cytosol 10.75 35.19
Zm00001d015239_P007 Maize mitochondrion 50.57 35.17
VIT_09s0054g01330.t01 Wine grape cytosol, mitochondrion, peroxisome 4.34 33.82
Zm00001d035389_P001 Maize cytosol, nucleus, peroxisome 37.17 33.79
Zm00001d030813_P001 Maize cytosol 15.66 33.74
Zm00001d030819_P005 Maize cytosol 23.58 33.24
VIT_09s0054g01090.t01 Wine grape cytosol 59.06 32.98
VIT_04s0008g03000.t01 Wine grape cytosol 19.06 32.9
Zm00001d014695_P001 Maize cytosol 47.55 32.56
Zm00001d013798_P001 Maize mitochondrion 46.04 32.4
Zm00001d024337_P001 Maize cytosol 41.89 30.71
PGSC0003DMT400062376 Potato extracellular, vacuole 9.62 26.42
PGSC0003DMT400077891 Potato extracellular, golgi, mitochondrion, plastid 21.13 26.05
Zm00001d030824_P001 Maize cytosol 15.85 25.69
Zm00001d030818_P001 Maize cytosol 9.81 23.01
Zm00001d030814_P001 Maize cytosol 10.19 20.22
VIT_04s0008g02980.t01 Wine grape mitochondrion 5.66 19.23
CDY29789 Canola cytosol 2.45 13.27
PGSC0003DMT400048787 Potato cytosol 1.13 10.34
Protein Annotations
EnsemblPlants:Zm00001d008671_P001EnsemblPlants:Zm00001d008671_T001EnsemblPlantsGene:Zm00001d008671Gene3D:1.50.10.20GO:GO:0003674GO:GO:0003824
GO:GO:0016866InterPro:SQ_cyclase_CInterPro:SQ_cyclase_NInterPro:Terpene_synthase_CSInterPro:Terpenoid_cyclase/PrenylTrfasePANTHER:PTHR11764
PANTHER:PTHR11764:SF27PFAM:PF13243PFAM:PF13249ProteinID:AQK90412.1ScanProsite:PS01074SUPFAM:SSF48239
UniParc:UPI00084478DEUniProt:A0A1D6FEN9MapMan:9.1.4.3MapMan:9.1.5.3::
Description
Cycloartenol synthase
Coordinates
chr8:+:16753262..16778656
Molecular Weight (calculated)
59912.9 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.220
Length
530 amino acids
Sequence
(BLAST)
001: MSHLSTVQAH DGHWPGDNDG PLFLLPGLNE DGGWGLHIEG HNTMFGTTLN YVTLRLLGEG PNAGDGAIEK GRNWILKHEG ATYTTSWGKF WLTPKLWLMY
101: LPLMEHLREI TLNGMIVNLE RLGLDGRLWC HSRAVYLPMS YIYGKRFVGH MTPLVLELRN EIYEDPYSLI DWNKARNQCA KVAIEYTLCT QYHKTLEYEE
201: DLYYPHTFLQ DVLWATLHKF VEPIMQWPGI KIREIALRTA MRHIHYEDEC TQYINLGPVN KGNNGTQLWD AGLIVQAIVS TNLTEEFGPT LKLAHAFIKN
301: SQILDNCPGD LTQWYRHISK GGWPFSTVDH GWPVSDCTAT GLKAALLLSM VSPQIVGEPM EVDRLYDGVN CLISFMHINP SETFGGIMID YPYVECTSSS
401: IQALALFRKL YPGHRRKEVD NIINKGASFI ESMQRNDGSW YGSWGVCFTY ATWFAVKGLA CAGRTFNNSP VIKKACLHTS RRHATSCSEH KLGQLALIGA
501: GQAERDPTPL HRAAKVLINL QLVDGEFPQQ
Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.