Factsheet for VIT_09s0054g01550.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01200.t01	Wine grape	cytosol	12.4	93.07
VIT_09s0018g00630.t01	Wine grape	cytosol	91.16	91.16
VIT_09s0054g01180.t01	Wine grape	cytosol	77.18	90.98
VIT_09s0054g01120.t01	Wine grape	cytosol	85.22	90.73
VIT_09s0054g01110.t01	Wine grape	cytosol	92.08	87.69
VIT_09s0054g01250.t01	Wine grape	cytosol	32.98	84.18
VIT_11s0065g00640.t01	Wine grape	cytosol	78.5	78.29
VIT_09s0054g01500.t01	Wine grape	cytosol	10.16	77.0
VIT_10s0116g01060.t01	Wine grape	cytosol	8.71	74.16
Os02t0139700-01	Rice	cytosol	72.56	72.46
EES06259	Sorghum	cytosol	72.3	72.39
TraesCS6B01G139000.1	Wheat	golgi	71.9	71.71
TraesCS6A01G110800.1	Wheat	cytosol, golgi	71.9	71.71
VIT_09s0054g01090.t01	Wine grape	cytosol	88.39	70.6
EES06258	Sorghum	cytosol	70.05	69.78
Os02t0139500-02	Rice	cytosol	32.59	69.77
Zm00001d015234_P002	Maize	cytosol	69.79	69.42
Zm00001d053889_P004	Maize	cytosol	69.26	69.08
VIT_09s0054g01370.t01	Wine grape	cytosol	12.14	68.66
TraesCS6D01G099400.2	Wheat	cytosol	72.03	68.59
TraesCS2B01G407200.1	Wheat	cytosol	6.73	68.0
TraesCS2B01G407300.1	Wheat	cytosol	39.45	67.8
HORVU6Hr1G019840.10	Barley	mitochondrion	70.32	67.38
TraesCS2D01G387000.1	Wheat	cytosol, plastid	68.21	66.8
TraesCS6B01G138500.1	Wheat	cytosol	63.32	66.67
KXG29303	Sorghum	cytosol	7.12	65.85
TraesCS6A01G110200.1	Wheat	mitochondrion	65.04	65.38
TraesCS6D01G098800.1	Wheat	mitochondrion	65.7	65.1
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.67	64.18
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	22.16	64.12
TraesCS5D01G011800.1	Wheat	mitochondrion	63.32	63.24
TraesCS5A01G004900.1	Wheat	mitochondrion	63.19	63.11
VIT_11s0065g00030.t01	Wine grape	cytosol	62.27	62.27
TraesCS5D01G006600.1	Wheat	cytosol	61.87	61.71
TraesCS5D01G006700.1	Wheat	cytosol	61.74	61.58
VIT_09s0054g01130.t01	Wine grape	cytosol	15.17	61.5
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	51.58	61.38
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	60.69	60.77
VIT_09s0054g01220.t01	Wine grape	cytosol	60.55	60.63
EES08419	Sorghum	cytosol, mitochondrion, plastid	15.83	60.3
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	5.41	60.29
Zm00001d008674_P001	Maize	mitochondrion	41.16	60.23
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	13.06	60.0
TraesCS6D01G098600.1	Wheat	cytosol	66.62	59.48
Zm00001d008671_P001	Maize	cytosol	41.29	59.06
TraesCS5B01G004800.1	Wheat	cytosol	57.78	58.95
VIT_09s0054g01390.t01	Wine grape	cytosol	59.23	58.54
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	13.59	58.19
VIT_09s0054g01410.t01	Wine grape	cytosol	58.71	57.87
VIT_09s0054g01210.t01	Wine grape	cytosol	57.78	57.86
VIT_09s0054g01160.t01	Wine grape	extracellular	7.65	57.43
VIT_09s0054g01230.t01	Wine grape	cytosol	58.18	57.35
VIT_04s0008g03000.t01	Wine grape	cytosol	22.69	56.03
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	37.73	55.86
VIT_09s0054g01470.t01	Wine grape	cytosol	28.89	55.58
VIT_10s0003g03530.t01	Wine grape	cytosol	52.77	55.1
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	21.37	54.92
VIT_10s0003g03650.t01	Wine grape	cytosol	54.88	54.81
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.88	54.41
VIT_10s0003g03570.t01	Wine grape	cytosol	10.29	54.17
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	19.53	53.82
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.92	53.1
VIT_10s0003g03520.t01	Wine grape	cytosol	51.72	52.06
VIT_09s0054g01520.t01	Wine grape	cytosol	59.5	51.9
VIT_10s0003g03660.t01	Wine grape	cytosol	53.56	51.33
VIT_09s0054g01140.t01	Wine grape	extracellular	13.32	51.01
VIT_09s0054g01480.t01	Wine grape	cytosol	28.23	50.95
VIT_09s0054g01340.t01	Wine grape	cytosol	27.57	50.48
VIT_10s0003g03610.t01	Wine grape	cytosol	18.6	50.0
VIT_04s0008g02980.t01	Wine grape	mitochondrion	10.29	50.0
VIT_09s0054g01290.t01	Wine grape	cytosol	8.05	47.29
VIT_09s0054g01170.t01	Wine grape	cytosol	2.77	46.67
VIT_04s0008g02990.t01	Wine grape	cytosol	5.67	45.74
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.83	45.31
VIT_10s0003g03540.t01	Wine grape	cytosol	13.19	44.84
VIT_09s0054g01280.t01	Wine grape	cytosol	20.32	43.38
VIT_10s0003g03550.t01	Wine grape	extracellular	5.54	42.0
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	5.8	40.37

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100244476	wikigene:100244476	MapMan:9.1.4.3	MapMan:9.1.5.3	ProteinID:CCB45020
ProteinID:CCB45020.1	UniProt:F6GYI4	EMBL:FN594972	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	EntrezGene:LOC100244476	wikigene:LOC100244476	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074
PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase
TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00019840A3	ArrayExpress:VIT_09s0054g01550	EnsemblPlantsGene:VIT_09s0054g01550
EnsemblPlants:VIT_09s0054g01550.t01	RefSeq:XP_002273109	RefSeq:XP_002273109.2	RefSeq:XP_010655242.1	SEG:seg	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYI4]

Coordinates

chr9:-:22497219..22512603

Molecular Weight (calculated)

86129.1 Da

IEP (calculated)

6.005

GRAVY (calculated)

-0.224

Length

758 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIDSTNN FVGRQIWEFD PDYGTPDERA EVEAARENFW KNRFQVKLSS DLLWRMQFAR ENPCVTNLPQ IKVQDLEEVT EEVVTTTLRR
101: GLNFYSTIQA HDGHWPGDCG GPMFLLPGLV ITLYVTGALH VVLSIEQQRE MCRYLCNHQN EDGGWGLHIE GPSTMFGTVL NYVTLRLLGE ADFGAKGAME
201: KGQKWILDHG GATAITSWGK MWLSVLGAYE WFGTNPLPPE MWLCPYILPV HPGRMWCHCR MVYLPMSYLY GKKFVGPITS TIISLRKELY IVPYHEVDWN
301: QARNQCAKED LYYPHPLVQD ILWASLHKVL EPILGHWPGN NLREKALCTV MQHVHYEDEN TRYICLGPVN KVLNMLCCWI EDPNSEAFKL HIPRIFDYLW
401: IAEDGMKMQG YSGSQLWDTS FAVQAIISTN LGEEYGLTLR KAHEFIKNSQ VLEDCPGDLK FWYRHISKGA WPFSTADQGW PISDCTAEGL KAVLLLSKLP
501: VETVGEPLDM KHLSDAVNVI LSLQNADGGF ATYELTRSYR WVELINPAET FGDIVIDYPY VECTSAAIQA LTSFKKLYPE HRRHEIENCI SKAAKFIEEI
601: QAPDGSWYGC WGVCFTYGGW FGITGLIAAG NTYSNCPCIR KACDYLLSKE LASGGWGESY LSCQNKVYTN LPGDKPHIVN TAWAMLALIE AGQAGRDPNP
701: LHRAARILIN SQMKNGDFPQ EEIMGVFNKN CMINYSAYRN IFPIWALGEH RSRVLHSS

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.