Factsheet for VIT_11s0065g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	8.58	97.01
KRH41389	Soybean	cytosol	78.63	78.11
KRG92127	Soybean	cytosol	78.76	77.94
PGSC0003DMT400035250	Potato	cytosol	67.81	74.28
Solyc07g042630.2.1	Tomato	cytosol	73.09	73.28
VIT_09s0054g01200.t01	Wine grape	cytosol	8.71	65.35
VIT_09s0054g01220.t01	Wine grape	cytosol	64.12	64.2
VIT_11s0065g00640.t01	Wine grape	cytosol	64.12	63.95
VIT_09s0054g01180.t01	Wine grape	cytosol	53.83	63.45
VIT_09s0054g01160.t01	Wine grape	extracellular	8.44	63.37
VIT_10s0116g01060.t01	Wine grape	cytosol	7.39	62.92
VIT_09s0018g00630.t01	Wine grape	cytosol	62.66	62.66
VIT_09s0054g01550.t01	Wine grape	cytosol	62.27	62.27
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	21.5	62.21
VIT_09s0054g01120.t01	Wine grape	cytosol	58.18	61.94
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	41.82	61.91
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.54	61.76
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	24.01	61.69
VIT_09s0054g01390.t01	Wine grape	cytosol	61.87	61.15
VIT_10s0003g03530.t01	Wine grape	cytosol	58.31	60.88
VIT_09s0054g01410.t01	Wine grape	cytosol	61.74	60.86
VIT_09s0054g01210.t01	Wine grape	cytosol	60.69	60.77
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	21.9	60.36
VIT_09s0054g01470.t01	Wine grape	cytosol	31.27	60.15
VIT_09s0054g01500.t01	Wine grape	cytosol	7.92	60.0
VIT_09s0054g01230.t01	Wine grape	cytosol	60.69	59.82
VIT_10s0003g03650.t01	Wine grape	cytosol	59.89	59.82
VIT_09s0054g01110.t01	Wine grape	cytosol	62.53	59.55
VIT_04s0008g03000.t01	Wine grape	cytosol	24.01	59.28
VIT_10s0003g03570.t01	Wine grape	cytosol	11.21	59.03
VIT_09s0054g01250.t01	Wine grape	cytosol	22.82	58.25
VIT_09s0054g01140.t01	Wine grape	extracellular	15.17	58.08
VIT_10s0003g03520.t01	Wine grape	cytosol	57.39	57.77
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	8.58	57.52
VIT_10s0003g03660.t01	Wine grape	cytosol	59.5	57.02
VIT_09s0054g01370.t01	Wine grape	cytosol	9.89	55.97
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	12.14	55.76
TraesCS4A01G495100.1	Wheat	cytosol	55.41	55.48
VIT_10s0003g03610.t01	Wine grape	cytosol	20.45	54.96
VIT_09s0054g01340.t01	Wine grape	cytosol	29.95	54.83
TraesCS7D01G004000.1	Wheat	cytosol	54.88	54.81
TraesCS7A01G003500.1	Wheat	cytosol	54.62	54.55
VIT_09s0054g01130.t01	Wine grape	cytosol	13.46	54.55
VIT_09s0054g01520.t01	Wine grape	cytosol	62.4	54.43
EES13537	Sorghum	cytosol	54.35	54.07
VIT_10s0003g03540.t01	Wine grape	cytosol	15.44	52.47
HORVU7Hr1G000400.1	Barley	cytosol, plastid	50.92	52.37
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	7.52	52.29
Zm00001d024337_P001	Maize	cytosol	49.87	52.28
Os08t0223900-00	Rice	cytosol	53.43	51.59
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.62	51.47
VIT_09s0054g01280.t01	Wine grape	cytosol	24.01	51.27
VIT_09s0054g01170.t01	Wine grape	cytosol	3.03	51.11
VIT_09s0054g01480.t01	Wine grape	cytosol	27.97	50.48
VIT_09s0054g01090.t01	Wine grape	cytosol	62.01	49.53
VIT_04s0008g02990.t01	Wine grape	cytosol	6.07	48.94
VIT_04s0008g02980.t01	Wine grape	mitochondrion	10.03	48.72
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.09	48.44
VIT_09s0054g01290.t01	Wine grape	cytosol	8.18	48.06
VIT_10s0003g03550.t01	Wine grape	extracellular	5.8	44.0

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100241546	wikigene:100241546	MapMan:9.1.4.3	EMBL:AM435276	ProteinID:CAN60556
ProteinID:CAN60556.1	ProteinID:CCB48899	ProteinID:CCB48899.1	UniProt:F6H9M9	EMBL:FN595502	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0016866
EntrezGene:LOC100241546	wikigene:LOC100241546	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764
PANTHER:PTHR11764:SF19	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787
TMHMM:TMhelix	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002108189	ArrayExpress:VIT_11s0065g00030	EnsemblPlantsGene:VIT_11s0065g00030
EnsemblPlants:VIT_11s0065g00030.t01	RefSeq:XP_002269060	RefSeq:XP_002269060.1	SEG:seg	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6H9M9]

Coordinates

chr11:-:13087576..13101552

Molecular Weight (calculated)

86594.6 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.316

Length

758 amino acids

Sequence
(BLAST)

001: MDKGMWKLKI AEGKGPWLMT VNNHIGRQHW EFDPDAGSSQ ERAEVERVRE EFKKNRFQFK QSADLLMRMQ LTKENGCGPI PAAVKVKETE DATKEAVTTT
101: LRRAISFYST IQAHDGHWPA ESAGPLFFLP PLVLALYIIG AVNAVLSLQH QKEIIRYIYN HQNEDGGWGI HIAGHSTIFG SAFSYIALRL LGEGPEGGED
201: GAMARGRKWI LDHGGAVGIP SWGKFWLTVL GVYEWSGCNP LPPEFWLLPK ISPIHPGKML CYCRLVYMPM SYLYGKRFVG RITGLVQSLR EELYIEPYRE
301: INWNKARNSC AKEDLYYPHP LAQDMLWGFL HHVAEPILTR WPFSIMREKA LKVALKHIHY EDENSRYYCI GCVEKVLCLL ACWVEDPNSE AYKRHLARIP
401: DYLWMAEDGM KMQSFGCQMW DAAFAIQAII SSDLAHEYGP TLRKAHDFVK ASQVRQNPTG NFTEMYRHTC KGAWTFSTQD HGWQVSDCTG EGLKVALLFS
501: QMSPDLVGEK MEKERFYDAV NVILSLQSSN GGFPAWEPQR AFRWLEKFNP TEFFEDVLIE REYVECTSSA IQGLILFIKL HPEHRRKEIE SCISRAIHYI
601: EDTQNPDGSW YGCWGICYTY GTWFGVEGLV ACGKTYQNSP ALRKACEFLL SKQLPDGGWG ESYLSSTNKV YTNLEGNRSN LVNTSWALLA LIEGGQAEID
701: PTPIHRGMRV LINSQMEDGD FPQQEITGVF MKNCTLNYSS YRNIFPIWAL GEYSRRVL

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.