Factsheet for VIT_09s0054g01390.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01470.t01	Wine grape	cytosol	50.07	97.46
VIT_09s0054g01370.t01	Wine grape	cytosol	16.17	92.54
VIT_09s0054g01220.t01	Wine grape	cytosol	91.0	92.21
VIT_09s0054g01230.t01	Wine grape	cytosol	92.18	91.94
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	60.89	91.21
VIT_09s0054g01410.t01	Wine grape	cytosol	91.26	91.03
VIT_09s0054g01340.t01	Wine grape	cytosol	48.5	89.86
VIT_09s0054g01500.t01	Wine grape	cytosol	11.47	88.0
VIT_09s0054g01520.t01	Wine grape	cytosol	94.92	83.77
VIT_09s0054g01480.t01	Wine grape	cytosol	44.85	81.9
PGSC0003DMT400048796	Potato	cytosol	79.27	79.89
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	7.04	79.41
VIT_09s0054g01160.t01	Wine grape	extracellular	10.43	79.21
VIT_09s0054g01210.t01	Wine grape	cytosol	77.84	78.86
PGSC0003DMT400043981	Potato	cytosol	61.93	77.87
PGSC0003DMT400051584	Potato	cytosol	76.01	76.61
PGSC0003DMT400048795	Potato	cytosol	72.75	76.13
VIT_09s0054g01130.t01	Wine grape	cytosol	18.51	75.94
VIT_09s0054g01140.t01	Wine grape	extracellular	18.9	73.23
VIT_09s0054g01290.t01	Wine grape	cytosol	11.86	70.54
VIT_04s0008g03000.t01	Wine grape	cytosol	27.12	67.75
VIT_09s0054g01280.t01	Wine grape	cytosol	31.03	67.04
Solyc12g035440.1.1	Tomato	cytosol	7.17	63.22
VIT_04s0008g02990.t01	Wine grape	cytosol	7.69	62.77
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.48	62.69
VIT_09s0054g01170.t01	Wine grape	cytosol	3.65	62.22
VIT_10s0003g03530.t01	Wine grape	cytosol	58.8	62.12
VIT_11s0065g00030.t01	Wine grape	cytosol	61.15	61.87
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	23.73	61.69
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	8.74	61.47
VIT_10s0003g03650.t01	Wine grape	cytosol	60.76	61.4
VIT_09s0054g01180.t01	Wine grape	cytosol	50.98	60.81
VIT_10s0003g03520.t01	Wine grape	cytosol	58.67	59.76
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	21.38	59.64
VIT_09s0054g01120.t01	Wine grape	cytosol	55.28	59.55
VIT_09s0018g00630.t01	Wine grape	cytosol	58.8	59.5
VIT_09s0054g01550.t01	Wine grape	cytosol	58.54	59.23
VIT_10s0003g03660.t01	Wine grape	cytosol	59.71	57.9
VIT_09s0054g01200.t01	Wine grape	cytosol	7.56	57.43
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	19.56	57.25
VIT_09s0054g01110.t01	Wine grape	cytosol	59.06	56.91
VIT_11s0065g00640.t01	Wine grape	cytosol	55.93	56.45
VIT_04s0008g02980.t01	Wine grape	mitochondrion	11.47	56.41
VIT_10s0003g03610.t01	Wine grape	cytosol	20.34	55.32
VIT_10s0116g01060.t01	Wine grape	cytosol	6.39	55.06
VIT_10s0003g03570.t01	Wine grape	cytosol	10.3	54.86
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.69	52.21
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	11.21	52.12
TraesCS4A01G495100.1	Wheat	cytosol	51.24	51.92
TraesCS7D01G004000.1	Wheat	cytosol	50.72	51.25
VIT_09s0054g01250.t01	Wine grape	cytosol	19.82	51.18
VIT_10s0003g03540.t01	Wine grape	cytosol	14.86	51.12
TraesCS7A01G003500.1	Wheat	cytosol	50.59	51.12
VIT_10s0003g03550.t01	Wine grape	extracellular	6.65	51.0
EES13537	Sorghum	cytosol	50.59	50.92
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.17	50.0
Os08t0223900-00	Rice	cytosol	51.11	49.94
Zm00001d024337_P001	Maize	cytosol	46.81	49.65
HORVU7Hr1G000400.1	Barley	cytosol, plastid	47.59	49.53
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.17	47.06
VIT_09s0054g01090.t01	Wine grape	cytosol	56.45	45.63

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100252187	wikigene:100252187	EntrezGene:100254808	wikigene:100254808	MapMan:9.1.4.3
ProteinID:CCB45028	ProteinID:CCB45028.1	UniProt:F6GYJ2	EMBL:FN594972	GO:GO:0003674	GO:GO:0003824
GO:GO:0016853	GO:GO:0016866	EntrezGene:LOC100252187	wikigene:LOC100252187	EntrezGene:LOC100254808	wikigene:LOC100254808
PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002109518	ArrayExpress:VIT_09s0054g01390	EnsemblPlantsGene:VIT_09s0054g01390	EnsemblPlants:VIT_09s0054g01390.t01	RefSeq:XP_002265019	RefSeq:XP_002265019.2
RefSeq:XP_002269328	RefSeq:XP_002269328.2	RefSeq:XP_019077725.1	RefSeq:XP_019077726.1	SEG:seg	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYJ2]

Coordinates

chr9:-:22308012..22313613

Molecular Weight (calculated)

88071.2 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.343

Length

767 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIYSTNN FVGRQIWEFD PDYGTTEERA EVEAARENFW KNRFQVKPSS DLLWRMQFLR EKNFKQTIPQ AKVGDGEEIT YETATAAVRR
101: GAHFFSALQA SDGHWPAENA GPLYFLPPLV MCLYITGHLD TVFPGEYRKE ILRYLYCHQN EDGGWGLHIE GHSTMFCTTL SYICMRILGE GRDGGRDNAC
201: ARGRKWILDR GGVTSIPSWG KTWLSIFGLF DWSGSNPMPP EFWLFPSRLP MHPAKMWCYS RLVYMPMSYL YGKRFVGPIT PLVLELREEL FLQAYNEINW
301: KKVRHLCAKE DLYYPHPLIQ DLMWDSLYIC TEPLLTRWPF NKLRQKALEV TMKHIHYEDE NSRYITIASV EKALCMLTCW VEDPNGDYFK KHLARIPDFI
401: WVAEDGIKMQ TFGSQEWDTG FALQALLACN MTNEIGPTLK KGHEFIKESQ VKDNPSGDFK SMYRKISQGS WTFSDQDHGW QVSDCTAEGL KCCLLFSMMA
501: PEIVGMEPER LFDSVNILLS LQSKNGGLAV WEPAGASEWL ELFNPSEIFE DIVIEHEYVE CTASAIQALV LFKKLYPQHR TKEIDNFITN ATKYIEDQQM
601: PDGSWYGNWG VCFTYGSWFA LGGLAAAGRT YHNCLAIGRA VEFLLKSQRD DGGWGESYIS CQDKKLTHLE GNKSNLVQTG WALMGLLSSG QAERDPTPLH
701: RAAKLLINSQ MEDGDFPQQE ITGAFMKNCM LHYADYRNIF PLWALAEYVS ECHRLKSGCI AMPKKHL

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.